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Sodium in PDB 4fo6: Crystal Structure of the Pre-Catalytic Ternary Complex of Polymerase Lambda with A Datp Analog Opposite A Templating T and An Rcmp at the Primer Terminus.
Enzymatic activity of Crystal Structure of the Pre-Catalytic Ternary Complex of Polymerase Lambda with A Datp Analog Opposite A Templating T and An Rcmp at the Primer Terminus.
All present enzymatic activity of Crystal Structure of the Pre-Catalytic Ternary Complex of Polymerase Lambda with A Datp Analog Opposite A Templating T and An Rcmp at the Primer Terminus.:
2.7.7.7;
2.7.7.7;
Protein crystallography data
The structure of Crystal Structure of the Pre-Catalytic Ternary Complex of Polymerase Lambda with A Datp Analog Opposite A Templating T and An Rcmp at the Primer Terminus., PDB code: 4fo6
was solved by
R.A.Gosavi,
A.F.Moon,
T.A.Kunkel,
L.C.Pedersen,
K.Bebenek,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 24.03 / 2.01 |
| Space group | P 21 21 21 |
| Cell size a, b, c (Å), α, β, γ (°) | 55.780, 63.655, 141.470, 90.00, 90.00, 90.00 |
| R / Rfree (%) | 19 / 23.1 |
Other elements in 4fo6:
The structure of Crystal Structure of the Pre-Catalytic Ternary Complex of Polymerase Lambda with A Datp Analog Opposite A Templating T and An Rcmp at the Primer Terminus. also contains other interesting chemical elements:
| Magnesium | (Mg) | 1 atom |
| Manganese | (Mn) | 1 atom |
| Chlorine | (Cl) | 1 atom |
Sodium Binding Sites:
The binding sites of Sodium atom in the Crystal Structure of the Pre-Catalytic Ternary Complex of Polymerase Lambda with A Datp Analog Opposite A Templating T and An Rcmp at the Primer Terminus.
(pdb code 4fo6). This binding sites where shown within
5.0 Angstroms radius around Sodium atom.
In total 2 binding sites of Sodium where determined in the Crystal Structure of the Pre-Catalytic Ternary Complex of Polymerase Lambda with A Datp Analog Opposite A Templating T and An Rcmp at the Primer Terminus., PDB code: 4fo6:
Jump to Sodium binding site number: 1; 2;
In total 2 binding sites of Sodium where determined in the Crystal Structure of the Pre-Catalytic Ternary Complex of Polymerase Lambda with A Datp Analog Opposite A Templating T and An Rcmp at the Primer Terminus., PDB code: 4fo6:
Jump to Sodium binding site number: 1; 2;
Sodium binding site 1 out of 2 in 4fo6
Go back to
Sodium Binding Sites List in 4fo6
Sodium binding site 1 out
of 2 in the Crystal Structure of the Pre-Catalytic Ternary Complex of Polymerase Lambda with A Datp Analog Opposite A Templating T and An Rcmp at the Primer Terminus.
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Sodium with other atoms in the Na binding
site number 1 of Crystal Structure of the Pre-Catalytic Ternary Complex of Polymerase Lambda with A Datp Analog Opposite A Templating T and An Rcmp at the Primer Terminus. within 5.0Å range:
|
Sodium binding site 2 out of 2 in 4fo6
Go back to
Sodium Binding Sites List in 4fo6
Sodium binding site 2 out
of 2 in the Crystal Structure of the Pre-Catalytic Ternary Complex of Polymerase Lambda with A Datp Analog Opposite A Templating T and An Rcmp at the Primer Terminus.
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Sodium with other atoms in the Na binding
site number 2 of Crystal Structure of the Pre-Catalytic Ternary Complex of Polymerase Lambda with A Datp Analog Opposite A Templating T and An Rcmp at the Primer Terminus. within 5.0Å range:
|
Reference:
R.A.Gosavi,
A.F.Moon,
T.A.Kunkel,
L.C.Pedersen,
K.Bebenek.
The Catalytic Cycle For Ribonucleotide Incorporation By Human Dna Pol Lambda Nucleic Acids Res. V. 40 1 2012.
ISSN: ISSN 0305-1048
PubMed: 22584622
DOI: 10.1093/NAR/GKS413
Page generated: Tue Dec 15 06:40:41 2020
ISSN: ISSN 0305-1048
PubMed: 22584622
DOI: 10.1093/NAR/GKS413
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