Atomistry » Sodium » PDB 4f5r-4foi » 4f7a
Atomistry »
  Sodium »
    PDB 4f5r-4foi »
      4f7a »

Sodium in PDB 4f7a: Crystal Structure of A Susd Homolog (BVU_2203) From Bacteroides Vulgatus Atcc 8482 at 1.85 A Resolution

Protein crystallography data

The structure of Crystal Structure of A Susd Homolog (BVU_2203) From Bacteroides Vulgatus Atcc 8482 at 1.85 A Resolution, PDB code: 4f7a was solved by Joint Center For Structural Genomics (Jcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.78 / 1.85
Space group P 43 3 2
Cell size a, b, c (Å), α, β, γ (°) 160.379, 160.379, 160.379, 90.00, 90.00, 90.00
R / Rfree (%) 14.1 / 16.2

Sodium Binding Sites:

The binding sites of Sodium atom in the Crystal Structure of A Susd Homolog (BVU_2203) From Bacteroides Vulgatus Atcc 8482 at 1.85 A Resolution (pdb code 4f7a). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Crystal Structure of A Susd Homolog (BVU_2203) From Bacteroides Vulgatus Atcc 8482 at 1.85 A Resolution, PDB code: 4f7a:

Sodium binding site 1 out of 1 in 4f7a

Go back to Sodium Binding Sites List in 4f7a
Sodium binding site 1 out of 1 in the Crystal Structure of A Susd Homolog (BVU_2203) From Bacteroides Vulgatus Atcc 8482 at 1.85 A Resolution


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Crystal Structure of A Susd Homolog (BVU_2203) From Bacteroides Vulgatus Atcc 8482 at 1.85 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Na604

b:10.6
occ:0.50
O A:HOH844 2.3 17.1 1.0
O A:HOH1214 2.3 39.9 1.0
O A:HOH999 2.3 22.4 1.0
O A:HOH810 2.6 20.5 1.0
O A:HOH1088 4.0 37.4 1.0
O A:HOH1061 4.1 44.0 1.0
O A:HOH887 4.2 18.6 1.0
OD2 A:ASP491 4.3 16.1 1.0
OD2 A:ASP489 4.4 17.3 1.0
OD1 A:ASP489 4.5 20.5 1.0
CB A:ASP491 4.6 14.3 1.0
CG A:ASP489 4.9 18.6 1.0

Reference:

Joint Center For Structural Genomics (Jcsg), Joint Center For Structural Genomics (Jcsg). N/A N/A.
Page generated: Mon Oct 7 15:18:09 2024

Last articles

Zn in 9J0N
Zn in 9J0O
Zn in 9J0P
Zn in 9FJX
Zn in 9EKB
Zn in 9C0F
Zn in 9CAH
Zn in 9CH0
Zn in 9CH3
Zn in 9CH1
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy