Sodium in PDB 4f06: Crystal Structure of Solute Binding Protein of Abc Transporter From Rhodopseudomonas Palustris HAA2 RPB_2270 in Complex with P- Hydroxybenzoic Acid

The structure of Crystal Structure of Solute Binding Protein of Abc Transporter From Rhodopseudomonas Palustris HAA2 RPB_2270 in Complex with P- Hydroxybenzoic Acid, PDB code: 4f06 was solved by C.Chang, J.Mack, S.Zerbs, F.Collart, A.Joachimiak, Midwest Center Forstructural Genomics (Mcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	50.00 / 1.30
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	42.135, 61.174, 130.177, 90.00, 90.00, 90.00
R / Rfree (%)	12.2 / 14.3

The binding sites of Sodium atom in the Crystal Structure of Solute Binding Protein of Abc Transporter From Rhodopseudomonas Palustris HAA2 RPB_2270 in Complex with P- Hydroxybenzoic Acid (pdb code 4f06). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Crystal Structure of Solute Binding Protein of Abc Transporter From Rhodopseudomonas Palustris HAA2 RPB_2270 in Complex with P- Hydroxybenzoic Acid, PDB code: 4f06:

Sodium binding site 1 out of 1 in the Crystal Structure of Solute Binding Protein of Abc Transporter From Rhodopseudomonas Palustris HAA2 RPB_2270 in Complex with P- Hydroxybenzoic Acid


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Crystal Structure of Solute Binding Protein of Abc Transporter From Rhodopseudomonas Palustris HAA2 RPB_2270 in Complex with P- Hydroxybenzoic Acid within 5.0Å range: probe atom residue distance (Å) B Occ A:Na411 b:41.6 occ:1.00 O A:HOH876 2.0 45.3 1.0 O A:HOH767 2.3 36.0 1.0 O A:HOH531 2.7 15.3 1.0 O A:GLU352 3.1 14.2 0.5 O A:GLU352 3.4 13.6 0.5 CA A:THR353 4.0 7.9 1.0 CG A:GLU131 4.1 12.0 1.0 C A:GLU352 4.2 10.6 0.5 C A:GLU352 4.2 10.7 0.5 CG2 A:THR353 4.4 9.2 1.0 CD1 A:LEU388 4.5 10.3 1.0 N A:THR353 4.6 8.6 1.0 O4 A:SO4406 4.6 29.3 1.0 CB A:THR353 4.6 7.6 1.0 OE2 A:GLU131 4.7 22.4 1.0 O A:HOH845 4.7 25.4 1.0 NH2 A:ARG354 4.8 10.6 1.0 O A:THR353 4.8 9.1 1.0 CG A:GLU352 4.8 15.8 0.5 C A:THR353 4.8 7.6 1.0 CD A:GLU131 4.9 15.0 1.0

K.Michalska, C.Chang, J.C.Mack, S.Zerbs, A.Joachimiak, F.R.Collart. Characterization of Transport Proteins For Aromatic Compounds Derived From Lignin: Benzoate Derivative Binding Proteins. J.Mol.Biol. V. 423 555 2012.
ISSN: ISSN 0022-2836
PubMed: 22925578
DOI: 10.1016/J.JMB.2012.08.017