Sodium in PDB 4ct8: Competence or Damage-Inducible Protein Cina From Thermus Thermophilus

The structure of Competence or Damage-Inducible Protein Cina From Thermus Thermophilus, PDB code: 4ct8 was solved by J.Derrick, V.Karuppiah, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	76.46 / 2.16
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	72.970, 93.550, 132.690, 90.00, 90.00, 90.00
R / Rfree (%)	18.814 / 24.073

The binding sites of Sodium atom in the Competence or Damage-Inducible Protein Cina From Thermus Thermophilus (pdb code 4ct8). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Competence or Damage-Inducible Protein Cina From Thermus Thermophilus, PDB code: 4ct8:

Sodium binding site 1 out of 1 in the Competence or Damage-Inducible Protein Cina From Thermus Thermophilus


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Competence or Damage-Inducible Protein Cina From Thermus Thermophilus within 5.0Å range: probe atom residue distance (Å) B Occ B:Na402 b:14.8 occ:1.00 N B:GLY152 3.1 22.0 1.0 N B:LEU70 3.3 20.8 1.0 N B:GLY69 3.6 20.1 1.0 CA B:GLY68 3.8 20.4 1.0 CA B:PRO151 3.8 24.9 1.0 CA B:GLY152 3.9 23.4 1.0 CB B:LEU70 3.9 21.2 1.0 C B:PRO151 3.9 23.2 1.0 CA B:LEU70 3.9 21.4 1.0 C B:GLY68 3.9 20.3 1.0 N B:GLY71 4.1 23.9 1.0 CD B:PRO153 4.1 29.1 1.0 C B:LEU70 4.2 23.6 1.0 C B:GLY69 4.3 20.9 1.0 CA B:GLY69 4.4 19.4 1.0 CB B:PRO151 4.4 27.6 1.0 CG B:LEU70 4.5 25.0 1.0 N B:GLY68 4.7 22.3 1.0 O B:GLY68 4.8 22.6 1.0 O A:HOH2076 4.9 29.3 1.0 N B:PRO153 4.9 30.4 1.0 C B:GLY152 4.9 28.0 1.0 OD1 B:ASP76 5.0 23.0 1.0 CA B:GLY71 5.0 20.6 1.0

V.Karuppiah, A.Thistlethwaite, R.Dajani, J.Warwicker, J.P.Derrick. Structure and Mechanism of the Bifunctional Cina Enzyme From Thermus Thermophilus J.Biol.Chem. 201410.1074/Jbc.M114.608448.
ISSN: ESSN 1083-351X
PubMed: 25313401