Sodium in PDB 3zu5: Structure of the Enoyl-Acp Reductase Fabv From Yersinia Pestis with the Cofactor Nadh and the 2-Pyridone Inhibitor PT173

The structure of Structure of the Enoyl-Acp Reductase Fabv From Yersinia Pestis with the Cofactor Nadh and the 2-Pyridone Inhibitor PT173, PDB code: 3zu5 was solved by M.W.Hirschbeck, J.Kuper, P.J.Tonge, C.Kisker, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	38.12 / 2.00
Space group	P 31 2 1
Cell size a, b, c (Å), α, β, γ (°)	101.770, 101.770, 84.550, 90.00, 90.00, 120.00
R / Rfree (%)	18.7 / 22.8

The binding sites of Sodium atom in the Structure of the Enoyl-Acp Reductase Fabv From Yersinia Pestis with the Cofactor Nadh and the 2-Pyridone Inhibitor PT173 (pdb code 3zu5). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Structure of the Enoyl-Acp Reductase Fabv From Yersinia Pestis with the Cofactor Nadh and the 2-Pyridone Inhibitor PT173, PDB code: 3zu5:

Sodium binding site 1 out of 1 in the Structure of the Enoyl-Acp Reductase Fabv From Yersinia Pestis with the Cofactor Nadh and the 2-Pyridone Inhibitor PT173


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Structure of the Enoyl-Acp Reductase Fabv From Yersinia Pestis with the Cofactor Nadh and the 2-Pyridone Inhibitor PT173 within 5.0Å range: probe atom residue distance (Å) B Occ A:Na1402 b:41.0 occ:1.00 N A:GLY54 2.8 29.6 1.0 OG A:SER138 2.9 29.0 0.8 O A:THR51 2.9 28.7 1.0 O5B A:NAI1400 3.1 38.2 1.0 O2N A:NAI1400 3.2 36.7 1.0 O A:SER138 3.3 33.4 1.0 O A:GLY48 3.4 30.5 1.0 CA A:GLY54 3.4 30.8 1.0 C5D A:NAI1400 3.5 36.3 1.0 C5B A:NAI1400 3.6 36.3 1.0 N A:TYR53 3.6 28.4 1.0 C4B A:NAI1400 3.8 34.5 1.0 O3 A:NAI1400 3.8 37.3 1.0 C A:TYR53 3.8 29.1 1.0 PN A:NAI1400 3.9 39.2 1.0 OG A:SER138 3.9 32.9 0.2 CB A:SER138 3.9 33.0 0.2 CB A:SER138 3.9 32.1 0.8 PA A:NAI1400 4.0 36.8 1.0 C A:THR51 4.0 27.7 1.0 O1A A:NAI1400 4.0 38.0 1.0 C A:GLY52 4.1 28.3 1.0 CA A:TYR53 4.1 28.6 1.0 O5D A:NAI1400 4.1 38.8 1.0 C A:SER138 4.3 34.2 1.0 CA A:GLY52 4.4 28.1 1.0 N A:LEU55 4.4 29.5 1.0 CB A:TYR53 4.4 28.5 1.0 C A:GLY48 4.4 29.0 1.0 C A:GLY54 4.5 30.5 1.0 C3B A:NAI1400 4.6 34.6 1.0 N A:GLY52 4.7 28.2 1.0 OG1 A:THR51 4.7 28.1 1.0 O3B A:NAI1400 4.7 33.0 1.0 O A:GLY52 4.7 29.3 1.0 CA A:SER138 4.7 33.8 0.2 CA A:SER138 4.8 33.4 0.8 C4D A:NAI1400 4.9 36.8 1.0 O A:TYR53 4.9 29.7 1.0 O4B A:NAI1400 5.0 35.6 1.0 CA A:GLY48 5.0 30.1 1.0

M.W.Hirschbeck, J.Kuper, H.Lu, N.Liu, C.Neckles, S.Shah, S.Wagner, C.A.Sotriffer, P.J.Tonge, C.Kisker. Structure of the Yersinia Pestis Fabv Enoyl-Acp Reductase and Its Interaction with Two 2-Pyridone Inhibitors Structure V. 20 89 2012.
ISSN: ISSN 0969-2126
PubMed: 22244758
DOI: 10.1016/J.STR.2011.07.019