Sodium in PDB 3urg: The Crystal Structure of Anabaena Ccbp

The structure of The Crystal Structure of Anabaena Ccbp, PDB code: 3urg was solved by X.X.Fan, X.Liu, X.D.Su, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	10.00 / 2.00
Space group	P 31 2 1
Cell size a, b, c (Å), α, β, γ (°)	50.740, 50.740, 150.770, 90.00, 90.00, 120.00
R / Rfree (%)	20.7 / 24.2

The binding sites of Sodium atom in the The Crystal Structure of Anabaena Ccbp (pdb code 3urg). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the The Crystal Structure of Anabaena Ccbp, PDB code: 3urg:

Sodium binding site 1 out of 1 in the The Crystal Structure of Anabaena Ccbp


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of The Crystal Structure of Anabaena Ccbp within 5.0Å range: probe atom residue distance (Å) B Occ A:Na127 b:47.9 occ:1.00 O A:ASP37 2.5 41.8 1.0 O A:LEU40 2.6 39.5 1.0 O A:HOH187 2.8 53.9 1.0 O A:HOH206 2.8 54.3 1.0 O A:HOH163 2.9 45.6 1.0 CD2 A:PHE42 3.5 36.1 1.0 C A:ASP37 3.7 40.2 1.0 CE2 A:PHE42 3.7 31.9 1.0 C A:LEU40 3.8 38.7 1.0 O A:ASP38 4.1 45.5 1.0 C A:ASP38 4.1 44.8 1.0 N A:PHE42 4.3 37.1 1.0 CA A:ASP38 4.4 40.9 1.0 N A:ASP38 4.5 37.1 1.0 OD2 A:ASP37 4.5 48.5 1.0 CG A:PHE42 4.5 36.3 1.0 N A:LEU40 4.5 35.4 1.0 CA A:GLU41 4.5 42.5 1.0 CA A:ASP37 4.6 32.0 1.0 N A:GLU41 4.6 36.4 1.0 N A:THR39 4.7 34.5 1.0 CA A:LEU40 4.7 33.2 1.0 O A:LEU36 4.8 33.2 1.0 OE2 A:GLU41 4.9 91.3 1.0 CZ A:PHE42 4.9 41.0 1.0 C A:THR39 5.0 37.6 1.0 CB A:PHE42 5.0 36.6 1.0 C A:GLU41 5.0 38.2 1.0 CB A:LEU40 5.0 34.4 1.0

X.X.Fan, Y.F.Zhou, X.Liu, L.F.Li, X.D.Su. Ellman'S Reagent in Promoting Crystallization and Structure Determination of Anabaena Ccbp. Acta Crystallogr.,Sect.F V. 68 1409 2012.
ISSN: ESSN 1744-3091
PubMed: 23143261
DOI: 10.1107/S1744309112034938