Atomistry » Sodium » PDB 3qq0-3r57 » 3r2l
Atomistry »
  Sodium »
    PDB 3qq0-3r57 »
      3r2l »

Sodium in PDB 3r2l: 1.85A Resolution Structure of Iron Soaked Ftna From Pseudomonas Aeruginosa (pH 7.5)

Protein crystallography data

The structure of 1.85A Resolution Structure of Iron Soaked Ftna From Pseudomonas Aeruginosa (pH 7.5), PDB code: 3r2l was solved by S.W.Lovell, K.P.Battaile, H.Yao, G.Jepkorir, P.V.Nama, S.Weeratunga, M.Rivera, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 26.01 / 1.85
Space group F 4 3 2
Cell size a, b, c (Å), α, β, γ (°) 172.520, 172.520, 172.520, 90.00, 90.00, 90.00
R / Rfree (%) 17.9 / 22.8

Other elements in 3r2l:

The structure of 1.85A Resolution Structure of Iron Soaked Ftna From Pseudomonas Aeruginosa (pH 7.5) also contains other interesting chemical elements:

Iron (Fe) 5 atoms

Sodium Binding Sites:

The binding sites of Sodium atom in the 1.85A Resolution Structure of Iron Soaked Ftna From Pseudomonas Aeruginosa (pH 7.5) (pdb code 3r2l). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the 1.85A Resolution Structure of Iron Soaked Ftna From Pseudomonas Aeruginosa (pH 7.5), PDB code: 3r2l:

Sodium binding site 1 out of 1 in 3r2l

Go back to Sodium Binding Sites List in 3r2l
Sodium binding site 1 out of 1 in the 1.85A Resolution Structure of Iron Soaked Ftna From Pseudomonas Aeruginosa (pH 7.5)


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of 1.85A Resolution Structure of Iron Soaked Ftna From Pseudomonas Aeruginosa (pH 7.5) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Na160

b:38.3
occ:0.25
OE1 A:GLN151 2.9 34.8 1.0
OD1 A:ASN148 3.1 26.4 0.5
O A:HOH226 3.1 34.6 0.2
OD1 A:ASN148 3.4 27.1 0.5
CD A:GLN151 3.9 31.4 1.0
CG A:ASN148 3.9 31.9 0.5
ND2 A:ASN148 4.2 18.0 0.5
CG A:ASN148 4.2 32.2 0.5
NE2 A:GLN151 4.2 36.5 1.0
CB A:ASN148 5.0 24.1 0.5
CB A:ASN148 5.0 24.1 0.5

Reference:

H.Yao, G.Jepkorir, S.Lovell, P.V.Nama, S.Weeratunga, K.P.Battaile, M.Rivera. Two Distinct Ferritin-Like Molecules in Pseudomonas Aeruginosa: the Product of the Bfra Gene Is A Bacterial Ferritin (Ftna) and Not A Bacterioferritin (Bfr). Biochemistry V. 50 5236 2011.
ISSN: ISSN 0006-2960
PubMed: 21574546
DOI: 10.1021/BI2004119
Page generated: Tue Dec 15 06:23:23 2020

Last articles

Zn in 7RRP
Zn in 7OKY
Zn in 7OL0
Zn in 7OKX
Zn in 7ONB
Zn in 7RSF
Zn in 7OUF
Zn in 7OUG
Zn in 7OUH
Zn in 7RGN
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy