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Sodium in PDB 3olh: Human 3-Mercaptopyruvate Sulfurtransferase

Enzymatic activity of Human 3-Mercaptopyruvate Sulfurtransferase

All present enzymatic activity of Human 3-Mercaptopyruvate Sulfurtransferase:
2.8.1.2;

Protein crystallography data

The structure of Human 3-Mercaptopyruvate Sulfurtransferase, PDB code: 3olh was solved by T.Karlberg, R.Collins, C.H.Arrowsmith, H.Berglund, C.Bountra, A.M.Edwards, S.Flodin, A.Flores, S.Graslund, M.Hammarstrom, I.Johansson, T.Kotenyova, E.Kouznetsova, M.Moche, P.Nordlund, T.Nyman, C.Persson, P.Schutz, A.Sehic, M.I.Siponen, A.G.Thorsell, L.Tresaugues, S.Van Den Berg, E.Wahlberg, J.Weigelt, M.Welin, H.Schuler, Structural Genomics Consortium (Sgc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 33.74 / 2.50
Space group H 3 2
Cell size a, b, c (Å), α, β, γ (°) 171.314, 171.314, 75.764, 90.00, 90.00, 120.00
R / Rfree (%) 22.1 / 27

Sodium Binding Sites:

The binding sites of Sodium atom in the Human 3-Mercaptopyruvate Sulfurtransferase (pdb code 3olh). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Human 3-Mercaptopyruvate Sulfurtransferase, PDB code: 3olh:

Sodium binding site 1 out of 1 in 3olh

Go back to Sodium Binding Sites List in 3olh
Sodium binding site 1 out of 1 in the Human 3-Mercaptopyruvate Sulfurtransferase


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Human 3-Mercaptopyruvate Sulfurtransferase within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Na292

b:39.9
occ:1.00
NE A:ARG68 3.5 46.1 1.0
NH2 A:ARG68 3.6 49.4 1.0
CZ A:ARG68 4.0 60.6 1.0
CD A:ARG68 4.6 38.7 1.0
NE2 A:GLN64 4.8 50.8 1.0

Reference:

T.Karlberg, R.Collins, C.H.Arrowsmith, H.Berglund, C.Bountra, A.M.Edwards, S.Flodin, A.Flores, S.Graslund, M.Hammarstrom, I.Johansson, T.Kotenyova, E.Kouznetsova, M.Moche, P.Nordlund, T.Nyman, C.Persson, A.Sehic, P.Schutz, M.I.Siponen, A.G.Thorsell, L.Tresaugues, S.Van Den Berg, E.Wahlberg, J.Weigelt, M.Welin, H.Schuler. Human 3-Mercaptopyruvate Sulfurtransferase To Be Published.
Page generated: Mon Oct 7 12:03:21 2024

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