Atomistry » Sodium » PDB 3nte-3off » 3oam
Atomistry »
  Sodium »
    PDB 3nte-3off »
      3oam »

Sodium in PDB 3oam: Crystal Structure of Cytidylyltransferase From Vibrio Cholerae

Enzymatic activity of Crystal Structure of Cytidylyltransferase From Vibrio Cholerae

All present enzymatic activity of Crystal Structure of Cytidylyltransferase From Vibrio Cholerae:
2.7.7.38;

Protein crystallography data

The structure of Crystal Structure of Cytidylyltransferase From Vibrio Cholerae, PDB code: 3oam was solved by J.Hattne, D.Borek, S.Grimshaw, C.Nakka, R.Rostankowski, Z.Otwinowski, Center For Structural Genomics Of Infectious Diseases (Csgid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 25.06 / 1.75
Space group P 1
Cell size a, b, c (Å), α, β, γ (°) 58.928, 68.209, 71.476, 82.73, 74.19, 76.97
R / Rfree (%) 19.8 / 23.2

Sodium Binding Sites:

The binding sites of Sodium atom in the Crystal Structure of Cytidylyltransferase From Vibrio Cholerae (pdb code 3oam). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Crystal Structure of Cytidylyltransferase From Vibrio Cholerae, PDB code: 3oam:

Sodium binding site 1 out of 1 in 3oam

Go back to Sodium Binding Sites List in 3oam
Sodium binding site 1 out of 1 in the Crystal Structure of Cytidylyltransferase From Vibrio Cholerae


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Crystal Structure of Cytidylyltransferase From Vibrio Cholerae within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Na253

b:27.7
occ:1.00
O A:GLU249 2.2 28.9 1.0
O A:HOH301 2.4 30.7 1.0
O A:GLN252 2.4 37.5 1.0
O A:HOH413 2.5 29.6 1.0
C A:GLU249 3.3 28.4 1.0
C A:GLN252 3.5 38.5 1.0
N A:GLN252 4.1 37.0 1.0
N A:ARG250 4.1 28.9 1.0
CA A:ARG250 4.2 30.9 1.0
CA A:GLN252 4.2 38.1 1.0
CA A:GLU249 4.2 27.5 1.0
CB A:GLU249 4.3 26.9 1.0
CB A:GLN252 4.4 38.2 1.0
C A:ARG250 4.5 32.7 1.0
OE1 A:GLU249 4.8 30.7 1.0
N A:ALA251 4.8 33.8 1.0
O A:ARG250 4.9 34.2 1.0

Reference:

J.Hattne, D.Borek, S.Grimshaw, C.Nakka, R.Rostankowski, Z.Otwinowski, Center For Structural Genomics Of Infectious Diseases(Csgid). Crystal Structure of Cytidylyltransferase From Vibrio Cholerae To Be Published.
Page generated: Mon Oct 7 11:57:37 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy