Atomistry » Sodium » PDB 3n0u-3nrv » 3nrv
Atomistry »
  Sodium »
    PDB 3n0u-3nrv »
      3nrv »

Sodium in PDB 3nrv: Crystal Structure of Marr/Emrr Family Transcriptional Regulator From Acinetobacter Sp. ADP1

Protein crystallography data

The structure of Crystal Structure of Marr/Emrr Family Transcriptional Regulator From Acinetobacter Sp. ADP1, PDB code: 3nrv was solved by R.Zhang, R.Wu, A.Joachimiak, Midwest Center For Structural Genomics(Mcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 32.58 / 2.00
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 72.809, 59.573, 97.753, 90.00, 89.99, 90.00
R / Rfree (%) 19.6 / 23

Sodium Binding Sites:

The binding sites of Sodium atom in the Crystal Structure of Marr/Emrr Family Transcriptional Regulator From Acinetobacter Sp. ADP1 (pdb code 3nrv). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Crystal Structure of Marr/Emrr Family Transcriptional Regulator From Acinetobacter Sp. ADP1, PDB code: 3nrv:

Sodium binding site 1 out of 1 in 3nrv

Go back to Sodium Binding Sites List in 3nrv
Sodium binding site 1 out of 1 in the Crystal Structure of Marr/Emrr Family Transcriptional Regulator From Acinetobacter Sp. ADP1


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Crystal Structure of Marr/Emrr Family Transcriptional Regulator From Acinetobacter Sp. ADP1 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Na146

b:58.0
occ:1.00
O B:PHE33 2.7 38.0 1.0
OH B:TYR80 2.8 45.0 1.0
CE2 B:TYR80 3.4 46.4 1.0
CZ B:TYR80 3.5 45.0 1.0
C B:PHE33 3.9 36.8 1.0
CA B:GLY34 3.9 39.9 1.0
CG2 B:ILE35 3.9 40.4 1.0
C B:GLY34 3.9 49.4 1.0
O B:GLY34 4.0 42.5 1.0
N B:GLY34 4.4 37.1 1.0
N B:ILE35 4.6 47.8 1.0
CD B:LYS78 4.6 47.9 1.0
CD2 B:TYR80 4.7 38.3 1.0
CE1 B:TYR80 4.8 46.3 1.0

Reference:

Z.Rongguang, W.Ruiying, J.Andrzej, Midwest Center For Structural Genomics (Mcsg). Crystal Strucutre of Marr/Emrr Family Transcriptional Regulator From Acinetobacter Sp. ADP1 To Be Published.
Page generated: Tue Dec 15 06:19:16 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy