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Sodium in PDB 3ihr: Crystal Structure of UCH37

Enzymatic activity of Crystal Structure of UCH37

All present enzymatic activity of Crystal Structure of UCH37:
3.4.19.12;

Protein crystallography data

The structure of Crystal Structure of UCH37, PDB code: 3ihr was solved by E.S.Burgie, C.A.Bingman, G.N.Phillips Jr., Center For Eukaryoticstructural Genomics (Cesg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 45.56 / 2.95
Space group I 2 2 2
Cell size a, b, c (Å), α, β, γ (°) 90.092, 98.736, 154.061, 90.00, 90.00, 90.00
R / Rfree (%) 19.9 / 24.2

Sodium Binding Sites:

The binding sites of Sodium atom in the Crystal Structure of UCH37 (pdb code 3ihr). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Crystal Structure of UCH37, PDB code: 3ihr:

Sodium binding site 1 out of 1 in 3ihr

Go back to Sodium Binding Sites List in 3ihr
Sodium binding site 1 out of 1 in the Crystal Structure of UCH37


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Crystal Structure of UCH37 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Na331

b:0.5
occ:1.00
O A:ASP75 2.0 0.7 1.0
O A:GLN119 2.3 0.1 1.0
C A:ASP75 3.0 0.5 1.0
C A:GLN119 3.4 91.2 1.0
CA A:ASP75 3.7 0.8 1.0
NZ A:LYS126 4.1 81.6 1.0
N A:THR76 4.1 0.1 1.0
CA A:GLN119 4.2 98.8 1.0
O A:LEU74 4.2 0.3 1.0
CB A:GLN119 4.3 67.8 1.0
N A:SER120 4.4 75.8 1.0
CB A:ASP75 4.4 0.6 1.0
O A:THR76 4.5 0.8 1.0
CA A:SER120 4.5 91.5 1.0
CA A:THR76 4.6 0.4 1.0
C A:THR76 4.7 90.3 1.0
CE A:LYS126 4.8 83.1 1.0
N A:ASP75 4.8 0.6 1.0
O A:ILE77 4.8 93.1 1.0
C A:LEU74 5.0 0.3 1.0

Reference:

S.E.Burgie, C.A.Bingman, A.B.Soni, G.N.Phillips. Structural Characterization of Human UCH37. Proteins 2011.
ISSN: ESSN 1097-0134
PubMed: 21953935
DOI: 10.1002/PROT.23147
Page generated: Mon Oct 7 10:57:29 2024

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