Sodium in PDB 3h5i: Crystal Structure of the N-Terminal Domain of A Response Regulator/Sensory Box/Ggdef 3-Domain Protein From Carboxydothermus Hydrogenoformans

The structure of Crystal Structure of the N-Terminal Domain of A Response Regulator/Sensory Box/Ggdef 3-Domain Protein From Carboxydothermus Hydrogenoformans, PDB code: 3h5i was solved by J.B.Bonanno, M.Gilmore, K.T.Bain, M.Iizuka, R.Romero, S.Wasserman, J.M.Sauder, S.K.Burley, S.C.Almo, New York Sgx Research Center Forstructural Genomics (Nysgxrc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	20.00 / 1.90
Space group	H 3 2
Cell size a, b, c (Å), α, β, γ (°)	86.668, 86.668, 131.156, 90.00, 90.00, 120.00
R / Rfree (%)	21.2 / 23.8

The structure of Crystal Structure of the N-Terminal Domain of A Response Regulator/Sensory Box/Ggdef 3-Domain Protein From Carboxydothermus Hydrogenoformans also contains other interesting chemical elements:

Chlorine

(Cl)

1 atom

The binding sites of Sodium atom in the Crystal Structure of the N-Terminal Domain of A Response Regulator/Sensory Box/Ggdef 3-Domain Protein From Carboxydothermus Hydrogenoformans (pdb code 3h5i). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Crystal Structure of the N-Terminal Domain of A Response Regulator/Sensory Box/Ggdef 3-Domain Protein From Carboxydothermus Hydrogenoformans, PDB code: 3h5i:

Sodium binding site 1 out of 1 in the Crystal Structure of the N-Terminal Domain of A Response Regulator/Sensory Box/Ggdef 3-Domain Protein From Carboxydothermus Hydrogenoformans


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Crystal Structure of the N-Terminal Domain of A Response Regulator/Sensory Box/Ggdef 3-Domain Protein From Carboxydothermus Hydrogenoformans within 5.0Å range: probe atom residue distance (Å) B Occ A:Na139 b:50.6 occ:0.33 O A:HOH141 2.6 55.0 1.0 NE2 A:HIS128 2.6 77.5 1.0 CD2 A:HIS128 3.5 76.5 1.0 CE1 A:HIS128 3.7 77.4 1.0 CG A:HIS128 4.7 76.1 1.0 ND1 A:HIS128 4.7 77.3 1.0

J.B.Bonanno, M.Gilmore, K.T.Bain, M.Iizuka, R.Romero, S.Wasserman, J.M.Sauder, S.K.Burley, S.C.Almo. Crystal Structure of the N-Terminal Domain of A Response Regulator/Sensory Box/Ggdef 3-Domain Protein From Carboxydothermus Hydrogenoformans To Be Published.