Sodium in PDB 3g7m: Structure of the Thaumatin-Like Xylanase Inhibitor Tlxi

The structure of Structure of the Thaumatin-Like Xylanase Inhibitor Tlxi, PDB code: 3g7m was solved by E.Vandermarliere, C.M.Courtin, W.Lammens, J.Schoepe, S.V.Strelkov, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	19.21 / 2.91
Space group	P 3 2 1
Cell size a, b, c (Å), α, β, γ (°)	104.019, 104.019, 30.047, 90.00, 90.00, 120.00
R / Rfree (%)	22.8 / 28.6

The binding sites of Sodium atom in the Structure of the Thaumatin-Like Xylanase Inhibitor Tlxi (pdb code 3g7m). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Structure of the Thaumatin-Like Xylanase Inhibitor Tlxi, PDB code: 3g7m:

Sodium binding site 1 out of 1 in the Structure of the Thaumatin-Like Xylanase Inhibitor Tlxi


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Structure of the Thaumatin-Like Xylanase Inhibitor Tlxi within 5.0Å range: probe atom residue distance (Å) B Occ A:Na152 b:28.1 occ:1.00 O A:SER72 3.6 21.3 1.0 NH2 A:ARG51 3.8 13.8 1.0 NH1 A:ARG51 3.9 14.6 1.0 CD1 A:LEU74 4.1 19.7 1.0 CA A:SER72 4.2 20.6 1.0 CZ A:ARG51 4.3 13.9 1.0 C A:SER72 4.4 21.2 1.0 CG A:LEU74 4.6 21.5 1.0 CE2 A:PHE56 4.6 18.8 1.0 CZ A:PHE56 4.9 19.3 1.0 O A:GLY71 4.9 19.3 1.0

E.Vandermarliere, W.Lammens, J.Schoepe, S.Rombouts, E.Fierens, K.Gebruers, G.Volckaert, A.Rabijns, J.A.Delcour, S.V.Strelkov, C.M.Courtin. Crystal Structure of the Noncompetitive Xylanase Inhibitor Tlxi, Member of the Small Thaumatin-Like Protein Family. Proteins V. 78 2391 2010.
ISSN: ISSN 0887-3585
PubMed: 20544973
DOI: 10.1002/PROT.22737