Sodium in PDB 3g13: Crystal Structure of Putative Conjugative Transposon Recombinase From Clostridium Difficile

The structure of Crystal Structure of Putative Conjugative Transposon Recombinase From Clostridium Difficile, PDB code: 3g13 was solved by A.Bagaria, S.K.Burley, S.Swaminathan, New York Sgx Research Center Forstructural Genomics (Nysgxrc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	47.84 / 2.00
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	64.470, 71.318, 94.176, 90.00, 90.00, 90.00
R / Rfree (%)	19.9 / 23.9

The binding sites of Sodium atom in the Crystal Structure of Putative Conjugative Transposon Recombinase From Clostridium Difficile (pdb code 3g13). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Crystal Structure of Putative Conjugative Transposon Recombinase From Clostridium Difficile, PDB code: 3g13:

Sodium binding site 1 out of 1 in the Crystal Structure of Putative Conjugative Transposon Recombinase From Clostridium Difficile


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Crystal Structure of Putative Conjugative Transposon Recombinase From Clostridium Difficile within 5.0Å range: probe atom residue distance (Å) B Occ B:Na201 b:23.6 occ:1.00 O B:ILE36 2.5 25.1 1.0 O B:ASN39 2.6 19.2 1.0 O B:TRP42 2.8 15.5 1.0 O B:HOH246 3.1 34.6 1.0 C B:ASN39 3.5 19.6 1.0 C B:ILE36 3.5 25.0 1.0 CG2 B:ILE36 3.7 25.8 1.0 C B:TRP42 3.8 15.1 1.0 CA B:LYS40 4.0 18.7 1.0 CA B:LYS37 4.1 25.2 1.0 N B:LYS40 4.1 18.2 1.0 N B:LYS37 4.2 24.7 1.0 C B:LYS40 4.3 17.6 1.0 N B:TRP42 4.3 14.4 1.0 O B:LYS37 4.4 25.4 1.0 C B:LYS37 4.4 24.2 1.0 O B:LYS40 4.5 17.8 1.0 CA B:TRP42 4.5 15.0 1.0 N B:ASN39 4.5 21.6 1.0 CA B:ASN39 4.6 20.0 1.0 CB B:TRP42 4.6 15.0 1.0 CA B:ILE36 4.6 24.9 1.0 N B:VAL43 4.8 15.1 1.0 CB B:ILE36 4.8 25.2 1.0 O B:HOH186 4.9 33.0 1.0 N B:GLU41 4.9 16.2 1.0 NH1 B:ARG5 4.9 23.9 1.0 CA B:VAL43 5.0 16.9 1.0

A.Bagaria, S.K.Burley, S.Swaminathan. Crystal Structure of A Putative Conjugative Transposon Recombinase From Clostridium Difficile To Be Published.