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Sodium in PDB 3foj: Crystal Structure of SSP1007 From Staphylococcus Saprophyticus Subsp. Saprophyticus. Northeast Structural Genomics Target SYR101A.

Protein crystallography data

The structure of Crystal Structure of SSP1007 From Staphylococcus Saprophyticus Subsp. Saprophyticus. Northeast Structural Genomics Target SYR101A., PDB code: 3foj was solved by J.Seetharaman, M.Abashidze, H.Wang, H.Janjua, E.L.Foote, R.Xiao, J.K.Everett, T.B.Acton, B.Rost, G.T.Montelione, J.F.Hunt, L.Tong, Northeast Structural Genomics Consortium (Nesg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 27.21 / 1.60
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 30.692, 42.130, 58.855, 90.00, 90.00, 90.00
R / Rfree (%) 19.4 / 23.5

Sodium Binding Sites:

The binding sites of Sodium atom in the Crystal Structure of SSP1007 From Staphylococcus Saprophyticus Subsp. Saprophyticus. Northeast Structural Genomics Target SYR101A. (pdb code 3foj). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Crystal Structure of SSP1007 From Staphylococcus Saprophyticus Subsp. Saprophyticus. Northeast Structural Genomics Target SYR101A., PDB code: 3foj:

Sodium binding site 1 out of 1 in 3foj

Go back to Sodium Binding Sites List in 3foj
Sodium binding site 1 out of 1 in the Crystal Structure of SSP1007 From Staphylococcus Saprophyticus Subsp. Saprophyticus. Northeast Structural Genomics Target SYR101A.


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Crystal Structure of SSP1007 From Staphylococcus Saprophyticus Subsp. Saprophyticus. Northeast Structural Genomics Target SYR101A. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Na101

b:9.2
occ:1.00
O A:THR40 2.5 12.3 1.0
OG1 A:THR40 2.7 16.0 1.0
O A:HOH143 2.7 21.0 1.0
O A:HOH146 2.9 40.0 1.0
C A:THR40 3.5 10.2 1.0
CB A:THR40 3.7 11.7 1.0
CA A:THR40 4.0 10.4 1.0
N A:THR40 4.1 11.4 1.0
N A:ILE41 4.7 10.4 1.0

Reference:

J.Seetharaman, M.Abashidze, H.Wang, H.Janjua, E.L.Foote, R.Xiao, J.K.Everett, T.B.Acton, B.Rost, G.T.Montelione, J.F.Hunt, L.Tong. Crystal Structure of SSP1007 From Staphylococcus Saprophyticus Subsp. Saprophyticus. Northeast Structural Genomics Target SYR101A. To Be Published.
Page generated: Tue Dec 15 06:10:57 2020

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