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Sodium in PDB 3f49: Anion-Triggered Engineered Subtilisin SUBT_BACAM

Enzymatic activity of Anion-Triggered Engineered Subtilisin SUBT_BACAM

All present enzymatic activity of Anion-Triggered Engineered Subtilisin SUBT_BACAM:
3.4.21.62;

Protein crystallography data

The structure of Anion-Triggered Engineered Subtilisin SUBT_BACAM, PDB code: 3f49 was solved by D.T.Gallagher, P.N.Bryan, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 16.00 / 1.70
Space group P 41 21 2
Cell size a, b, c (Å), α, β, γ (°) 58.456, 58.456, 126.278, 90.00, 90.00, 90.00
R / Rfree (%) 17.1 / 19.9

Sodium Binding Sites:

The binding sites of Sodium atom in the Anion-Triggered Engineered Subtilisin SUBT_BACAM (pdb code 3f49). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Anion-Triggered Engineered Subtilisin SUBT_BACAM, PDB code: 3f49:

Sodium binding site 1 out of 1 in 3f49

Go back to Sodium Binding Sites List in 3f49
Sodium binding site 1 out of 1 in the Anion-Triggered Engineered Subtilisin SUBT_BACAM


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Anion-Triggered Engineered Subtilisin SUBT_BACAM within 5.0Å range:
probe atom residue distance (Å) B Occ
S:Na276

b:17.8
occ:1.00
O S:VAL174 2.8 7.5 1.0
O S:ALA169 2.9 9.5 1.0
OD2 S:ASP197 2.9 11.0 1.0
O S:TYR171 2.9 8.9 1.0
O S:HOH378 3.0 17.7 1.0
O S:HOH459 3.1 23.1 1.0
O S:GLU195 3.1 9.2 1.0
C S:TYR171 3.7 9.2 1.0
CG S:ASP197 3.9 10.2 1.0
CB S:ALA176 3.9 8.2 1.0
C S:VAL174 3.9 7.7 1.0
C S:ALA169 4.1 8.8 1.0
N S:ALA176 4.1 6.2 1.0
OD1 S:ASP197 4.2 12.3 1.0
CA S:PRO172 4.2 10.3 1.0
C S:GLU195 4.2 9.4 1.0
C S:LYS170 4.2 9.3 1.0
O S:PRO172 4.3 9.6 1.0
N S:PRO172 4.3 9.9 1.0
O S:LYS170 4.3 10.4 1.0
NH2 S:ARG247 4.3 11.4 1.0
CB S:GLU195 4.4 9.4 1.0
C S:PRO172 4.4 9.8 1.0
N S:TYR171 4.4 9.4 1.0
CA S:GLU195 4.5 9.3 1.0
N S:VAL174 4.6 7.6 1.0
CA S:ALA176 4.6 6.6 1.0
CA S:VAL174 4.6 7.9 1.0
CA S:TYR171 4.7 9.8 1.0
CA S:LYS170 4.7 9.9 1.0
CB S:VAL174 4.8 8.5 1.0
N S:ILE175 4.9 7.5 1.0
N S:LYS170 4.9 9.0 1.0
C S:ILE175 4.9 6.9 1.0
CA S:ILE175 4.9 6.6 1.0

Reference:

P.N.Bryan, D.T.Gallagher, B.Ruan. Anion-Triggered Engineered Subtilisin SUBT_BACAM To Be Published.
Page generated: Tue Dec 15 06:10:19 2020

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