Sodium in PDB 3f2m: Urate Oxidase Complexed with 8-Azaxanthine at 150 Mpa

All present enzymatic activity of Urate Oxidase Complexed with 8-Azaxanthine at 150 Mpa:
1.7.3.3;

The structure of Urate Oxidase Complexed with 8-Azaxanthine at 150 Mpa, PDB code: 3f2m was solved by N.Colloc'h, E.Girard, R.Kahn, R.Fourme, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	14.82 / 1.80
Space group	I 2 2 2
Cell size a, b, c (Å), α, β, γ (°)	79.700, 95.870, 104.990, 90.00, 90.00, 90.00
R / Rfree (%)	18.2 / 21.8

The binding sites of Sodium atom in the Urate Oxidase Complexed with 8-Azaxanthine at 150 Mpa (pdb code 3f2m). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Urate Oxidase Complexed with 8-Azaxanthine at 150 Mpa, PDB code: 3f2m:

Sodium binding site 1 out of 1 in the Urate Oxidase Complexed with 8-Azaxanthine at 150 Mpa


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Urate Oxidase Complexed with 8-Azaxanthine at 150 Mpa within 5.0Å range: probe atom residue distance (Å) B Occ A:Na303 b:26.5 occ:1.00 O A:ILE88 2.3 24.6 1.0 O A:HOH558 2.4 35.7 1.0 OE1 A:GLU136 2.4 40.2 1.0 O A:TYR91 2.4 27.2 1.0 O A:ILE94 2.5 23.6 1.0 C A:ILE88 3.2 23.5 1.0 CD A:GLU136 3.5 41.9 1.0 O A:ASN92 3.5 31.2 1.0 C A:TYR91 3.5 27.2 1.0 CA A:ILE88 3.6 22.4 1.0 C A:ILE94 3.6 22.5 1.0 C A:ASN92 3.8 29.7 1.0 CA A:ASN92 3.9 30.5 1.0 CB A:ILE88 4.0 22.5 1.0 ND1 A:HIS95 4.1 35.0 1.0 N A:ILE94 4.1 23.7 1.0 N A:ASN92 4.2 28.7 1.0 OE2 A:GLU136 4.3 44.7 1.0 CG A:GLU136 4.3 36.6 1.0 CA A:ILE94 4.4 22.9 1.0 N A:GLU89 4.4 24.4 1.0 CA A:HIS95 4.5 21.9 1.0 N A:HIS95 4.5 21.4 1.0 N A:HIS93 4.6 28.2 1.0 CA A:TYR91 4.7 26.2 1.0 O A:PHE87 4.7 20.4 1.0 CE1 A:HIS95 4.7 33.4 1.0 N A:TYR91 4.7 26.5 1.0 CB A:ILE94 4.8 23.3 1.0 CG2 A:ILE88 4.8 21.2 1.0 CA A:GLU89 4.9 25.2 1.0 N A:ILE88 5.0 20.4 1.0 C A:HIS93 5.0 25.6 1.0

E.Girard, S.Marchal, J.Perez, S.Finet, R.Kahn, R.Fourme, G.Marassio, A.C.Dhaussy, T.Prange, M.Giffard, F.Dulin, F.Bonnete, R.Lange, J.H.Abraini, M.Mezouar, N.Colloc'h. Structure-Function Perturbation and Dissociation of Tetrameric Urate Oxidase By High Hydrostatic Pressure. Biophys.J. V. 98 2365 2010.
ISSN: ISSN 0006-3495
PubMed: 20483346
DOI: 10.1016/J.BPJ.2010.01.058