Sodium in PDB 3ah7: Crystal Structure of the Isc-Like [2FE-2S] Ferredoxin (Fdxb) From Pseudomonas Putida Jcm 20004

The structure of Crystal Structure of the Isc-Like [2FE-2S] Ferredoxin (Fdxb) From Pseudomonas Putida Jcm 20004, PDB code: 3ah7 was solved by T.Kumasaka, N.Shimizu, D.Ohmori, T.Iwasaki, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	37.92 / 1.90
Space group	P 61 2 2
Cell size a, b, c (Å), α, β, γ (°)	87.575, 87.575, 73.139, 90.00, 90.00, 120.00
R / Rfree (%)	18.2 / 21.6

The structure of Crystal Structure of the Isc-Like [2FE-2S] Ferredoxin (Fdxb) From Pseudomonas Putida Jcm 20004 also contains other interesting chemical elements:

Chlorine	(Cl)	1 atom
Iron	(Fe)	2 atoms

The binding sites of Sodium atom in the Crystal Structure of the Isc-Like [2FE-2S] Ferredoxin (Fdxb) From Pseudomonas Putida Jcm 20004 (pdb code 3ah7). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Crystal Structure of the Isc-Like [2FE-2S] Ferredoxin (Fdxb) From Pseudomonas Putida Jcm 20004, PDB code: 3ah7:

Sodium binding site 1 out of 1 in the Crystal Structure of the Isc-Like [2FE-2S] Ferredoxin (Fdxb) From Pseudomonas Putida Jcm 20004


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Crystal Structure of the Isc-Like [2FE-2S] Ferredoxin (Fdxb) From Pseudomonas Putida Jcm 20004 within 5.0Å range: probe atom residue distance (Å) B Occ A:Na202 b:26.9 occ:1.00 O A:HOH323 2.4 21.7 1.0 OE1 A:GLU38 2.5 18.3 1.0 CB A:GLU38 3.5 17.3 1.0 CD A:GLU38 3.7 21.3 1.0 O A:HOH352 3.8 23.6 1.0 OG A:SER103 4.1 13.7 1.0 CG A:GLU38 4.2 18.6 1.0 CZ A:PHE11 4.3 14.5 1.0 O A:THR49 4.4 11.2 1.0 CE1 A:HIS106 4.5 20.2 1.0 CB A:THR49 4.6 9.8 1.0 N A:GLU38 4.7 16.4 1.0 OE2 A:GLU38 4.7 22.2 1.0 CA A:GLU38 4.8 16.9 1.0 CB A:SER103 4.9 11.1 1.0 O A:HOH334 4.9 13.5 1.0 O A:HOH310 4.9 13.3 1.0 O A:HOH302 4.9 15.7 0.5 NE2 A:HIS106 5.0 20.1 1.0 CA A:THR49 5.0 10.3 1.0

T.Iwasaki, R.Kappl, G.Bracic, N.Shimizu, D.Ohmori, T.Kumasaka. Crystal Structure of the Isc-Like [2FE-2S] Ferredoxin (Fdxb) From Pseudomonas Putida Jcm 20004 To Be Published.