Sodium in PDB 2zhj: Crystal Structure Analysis of the Sodium-Bound Annexin A4 at 1.34 A Resolution

The structure of Crystal Structure Analysis of the Sodium-Bound Annexin A4 at 1.34 A Resolution, PDB code: 2zhj was solved by K.Butsushita, K.Ida, S.-I.Fukuoka, Y.Arii, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	10.00 / 1.35
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	58.427, 39.528, 65.510, 90.00, 95.71, 90.00
R / Rfree (%)	15.2 / 21.1

The binding sites of Sodium atom in the Crystal Structure Analysis of the Sodium-Bound Annexin A4 at 1.34 A Resolution (pdb code 2zhj). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total 2 binding sites of Sodium where determined in the Crystal Structure Analysis of the Sodium-Bound Annexin A4 at 1.34 A Resolution, PDB code: 2zhj:
Jump to Sodium binding site number: 1; 2;

Sodium binding site 1 out of 2 in the Crystal Structure Analysis of the Sodium-Bound Annexin A4 at 1.34 A Resolution


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Crystal Structure Analysis of the Sodium-Bound Annexin A4 at 1.34 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ A:Na320 b:30.6 occ:1.00 O A:MET99 2.4 27.8 1.0 O A:GLY101 2.5 31.2 1.0 OD2 A:ASP143 2.5 26.8 1.0 O A:GLY103 2.6 39.4 1.0 C A:MET99 3.4 21.6 1.0 CG A:ASP143 3.4 26.1 1.0 C A:GLY101 3.6 30.1 1.0 OD1 A:ASP143 3.7 32.0 1.0 C A:GLY103 3.7 31.1 1.0 O A:ALA102 3.8 44.4 1.0 OG1 A:THR104 3.8 28.9 1.0 C A:ALA102 3.9 33.6 1.0 CA A:MET99 4.0 19.2 1.0 O A:LYS100 4.2 34.0 1.0 C A:LYS100 4.2 29.0 1.0 N A:GLY103 4.2 35.8 1.0 N A:GLY101 4.3 31.4 1.0 N A:ALA102 4.4 30.6 1.0 N A:LYS100 4.4 23.4 1.0 CA A:ALA102 4.4 28.6 1.0 CA A:GLY103 4.5 37.1 1.0 CA A:GLY101 4.5 32.6 1.0 N A:THR104 4.5 24.2 1.0 CB A:MET99 4.6 20.8 1.0 O A:HOH594 4.7 37.0 1.0 CB A:ASP143 4.7 24.5 1.0 CA A:THR104 4.8 20.8 1.0 CA A:LYS100 4.8 27.4 1.0 CB A:THR104 4.9 21.1 1.0 O A:HOH623 5.0 38.9 1.0

Sodium binding site 2 out of 2 in the Crystal Structure Analysis of the Sodium-Bound Annexin A4 at 1.34 A Resolution


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 2 of Crystal Structure Analysis of the Sodium-Bound Annexin A4 at 1.34 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ A:Na321 b:27.2 occ:1.00 O A:GLY182 2.3 19.4 1.0 O A:GLY187 2.3 19.7 1.0 O A:ARG185 2.4 20.4 1.0 O A:HOH440 2.4 44.5 1.0 OE2 A:GLU227 2.4 26.1 1.0 O A:HOH416 2.7 66.7 1.0 C A:GLY182 3.2 18.1 1.0 C A:GLY187 3.3 18.2 1.0 CD A:GLU227 3.3 28.6 1.0 OE1 A:GLU227 3.5 43.5 1.0 C A:ARG185 3.5 19.8 1.0 N A:GLY187 3.6 21.3 1.0 CA A:GLY182 3.8 18.3 1.0 CA A:GLY187 4.0 21.7 1.0 OG1 A:THR188 4.1 21.2 1.0 C A:TRP186 4.1 19.9 1.0 CG A:ARG185 4.1 21.9 1.0 N A:ARG185 4.2 22.4 1.0 N A:GLU183 4.2 19.5 1.0 O A:HOH429 4.3 33.5 1.0 CA A:ARG185 4.3 20.1 1.0 N A:THR188 4.4 18.2 1.0 N A:TRP186 4.4 21.6 1.0 CA A:TRP186 4.4 20.1 1.0 CA A:GLU183 4.4 24.1 1.0 O A:GLU183 4.4 25.4 1.0 C A:GLU183 4.5 22.2 1.0 CA A:THR188 4.7 19.1 1.0 O A:TRP186 4.7 23.0 1.0 CG A:GLU227 4.8 26.8 1.0 CB A:ARG185 4.8 22.8 1.0 N A:GLY182 4.9 17.4 1.0

K.Butsushita, K.Inoue, K.Ida, S.-I.Fukuoka, Y.Arii. Structural Analysis For the Soduim-Dependent Dissociation of Annexin A4: Crystal Structures of Soduim-Bound Annexin A4 at High Resolutions To Be Published.