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    PDB 4aga-4eae
    PDB 4ecn-4g8t
    PDB 4gdt-8icw
    PDB 8icx-9icy

Sodium in the structure of Co-Bound Structure of Bjfixlh (pdb 2vv8)

The binding sites of Sodium atom in the structure of Co-Bound Structure of Bjfixlh (pdb code 2vv8). This binding sites where shown with 5.0 Angstroms radius around Sodium atom.
The 2vv8 structure was solved by R.A.AYERS, K.MOFFAT, with X-Ray Crystallography technique, brief refinement statistics is given in the table below:
Resolution (A)46.9-1.6
Space groupP1
a (A)48.923
b (A)50.296
c (A)58.993
alpha (°)73.37
beta (°)70.26
gamma (°)72.13
Rfactor (%)20.6
Rfree (%)24.9

Sodium Binding Sites:

Sodium binding site 1 out of 1 in 2vv8

Sodium binding site 1 out of 1 in 2vv8
Click to enlarge
stereopicture of Sodium binding site 1 out of 1 in 2vv8
Click to enlarge
Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 1 of Sodium in the PDB 2vv8. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: C: Leu181, C: Glu182, C: Ala183, C: Ile184, C: Gly185, C: Hoh2029,

conact list:

AtomAtomDistance (A)
NaO C:Leu1812.26
NaC C:Leu1813.48
NaCA C:Leu1814.59
NaO C:Glu1823.33
NaN C:Glu1824.17
NaC C:Glu1823.74
NaCA C:Glu1823.93
NaO C:Ala1834.96
NaN C:Ala1834.61
NaC C:Ala1834.60
NaO C:Ile1842.30
NaN C:Ile1844.16
NaCB C:Ile1844.46
NaCG2 C:Ile1844.84
NaC C:Ile1843.46
NaCA C:Ile1844.23
NaN C:Gly1854.45
NaCA C:Gly1854.57
NaO C:Hoh20293.06

interactive model:

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