Sodium in PDB 2vv7: Bjfixlh in Unliganded Ferrous Form

All present enzymatic activity of Bjfixlh in Unliganded Ferrous Form:
2.7.13.3;

The structure of Bjfixlh in Unliganded Ferrous Form, PDB code: 2vv7 was solved by R.A.Ayers, K.Moffat, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	46.27 / 1.81
Space group	P 1
Cell size a, b, c (Å), α, β, γ (°)	48.646, 49.814, 58.760, 73.19, 71.12, 71.74
R / Rfree (%)	19.7 / 24.7

The structure of Bjfixlh in Unliganded Ferrous Form also contains other interesting chemical elements:

Iron	(Fe)	4 atoms
Chlorine	(Cl)	2 atoms

The binding sites of Sodium atom in the Bjfixlh in Unliganded Ferrous Form (pdb code 2vv7). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Bjfixlh in Unliganded Ferrous Form, PDB code: 2vv7:

Sodium binding site 1 out of 1 in the Bjfixlh in Unliganded Ferrous Form


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Bjfixlh in Unliganded Ferrous Form within 5.0Å range: probe atom residue distance (Å) B Occ C:Na1259 b:38.6 occ:1.00 O C:LEU181 2.3 37.7 1.0 O C:ILE184 2.4 37.2 1.0 C C:LEU181 3.5 37.5 1.0 C C:ILE184 3.5 37.8 1.0 O C:GLU182 3.5 39.8 1.0 C C:GLU182 3.8 36.8 1.0 CA C:GLU182 4.0 36.6 1.0 N C:GLU182 4.2 36.0 1.0 N C:ILE184 4.3 36.4 1.0 CA C:ILE184 4.3 36.2 1.0 N C:GLY185 4.5 37.2 1.0 CB C:ILE184 4.5 36.7 1.0 CA C:GLY185 4.6 36.1 1.0 CA C:LEU181 4.6 37.1 1.0 N C:ALA183 4.7 35.8 1.0 C C:ALA183 4.7 36.7 1.0

R.A.Ayers, K.Moffat. Changes in Quaternary Structure in the Signaling Mechanisms of Pas Domains. Biochemistry V. 47 12078 2008.
ISSN: ISSN 0006-2960
PubMed: 18942854
DOI: 10.1021/BI801254C