Sodium in the structure of Biosynthetic Thiolase From Z. Ramigera. Complex of With O- Pantheteine-11-Pivalate. (pdb 2vu1)

The binding sites of Sodium atom in the structure of Biosynthetic Thiolase From Z. Ramigera. Complex of With O- Pantheteine-11-Pivalate. (pdb code 2vu1). This binding sites where shown with 5.0 Angstroms radius around Sodium atom. The 2vu1 structure was solved by P.KURSULA, W.SCHMITZ, R.K.WIERENGA, with X-Ray Crystallography technique, brief refinement statistics is given in the table below: Resolution (A) 20.0-1.5 Space group P1211 a (A) 84.298 b (A) 78.737 c (A) 148.339 alpha (°) 90.00 beta (°) 92.93 gamma (°) 90.00 Rfactor (%) 21.543 Rfree (%) 24.726 Sodium Binding Sites: Sodium binding site 1 out of 1 in 2vu1 Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 1 of Sodium in the PDB 2vu1. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: Asn24, A: Thr25, A: Pro26, A: Glu29, A: Lys205, A: Hoh2042, A: Hoh2051, A: Hoh2244, conact list: Atom Atom Distance (A) Na O A:Asn24 3.77 Na C A:Asn24 4.65 Na N A:Thr25 4.88 Na CB A:Thr25 4.63 Na CG2 A:Thr25 4.70 Na OG1 A:Thr25 4.33 Na CA A:Thr25 4.25 Na CD A:Pro26 4.01 Na CG A:Pro26 4.99 Na OE1 A:Glu29 2.69 Na OE2 A:Glu29 3.71 Na CD A:Glu29 3.56 Na CG A:Glu29 5.00 Na O A:Lys205 4.96 Na O A:Hoh2042 2.33 Na O A:Hoh2051 4.04 Na O A:Hoh2244 3.79 interactive model: