Sodium in PDB 2vn8: Crystal Structure of Human Reticulon 4 Interacting Protein 1 in Complex with Nadph

The structure of Crystal Structure of Human Reticulon 4 Interacting Protein 1 in Complex with Nadph, PDB code: 2vn8 was solved by A.C.W.Pike, K.Guo, J.Elkins, E.Ugochukwu, A.K.Roos, P.Filippakopoulos, F.Von Delft, A.Edwards, C.H.Arrowsmith, J.Weigelt, C.Bountra, U.Oppermann, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	50.00 / 2.10
Space group	P 32 2 1
Cell size a, b, c (Å), α, β, γ (°)	106.950, 106.950, 177.492, 90.00, 90.00, 120.00
R / Rfree (%)	17.5 / 21.3

The binding sites of Sodium atom in the Crystal Structure of Human Reticulon 4 Interacting Protein 1 in Complex with Nadph (pdb code 2vn8). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Crystal Structure of Human Reticulon 4 Interacting Protein 1 in Complex with Nadph, PDB code: 2vn8:

Sodium binding site 1 out of 1 in the Crystal Structure of Human Reticulon 4 Interacting Protein 1 in Complex with Nadph


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Crystal Structure of Human Reticulon 4 Interacting Protein 1 in Complex with Nadph within 5.0Å range: probe atom residue distance (Å) B Occ A:Na1397 b:56.0 occ:1.00 O5 A:CIT1398 2.1 36.8 1.0 OG1 A:THR176 2.3 45.1 1.0 O7 A:CIT1398 2.3 39.8 1.0 O A:HOH2167 2.4 40.7 1.0 O A:HOH2177 2.5 53.5 1.0 C6 A:CIT1398 3.0 40.6 1.0 C3 A:CIT1398 3.2 44.8 1.0 OD1 A:ASN394 3.5 56.5 1.0 O4 A:CIT1398 3.5 47.4 1.0 CB A:THR176 3.7 48.0 1.0 CG A:ASN394 4.0 49.9 1.0 N A:THR176 4.1 44.1 1.0 OXT A:VAL396 4.1 56.9 1.0 O A:HOH2175 4.1 54.3 1.0 C2 A:CIT1398 4.2 55.8 1.0 O6 A:CIT1398 4.2 33.8 1.0 C5 A:CIT1398 4.3 47.6 1.0 C4 A:CIT1398 4.3 48.7 1.0 CA A:THR176 4.4 44.8 1.0 ND2 A:ASN394 4.5 45.8 1.0 C1 A:CIT1398 4.6 68.1 1.0 CG2 A:THR176 4.6 44.8 1.0 O1 A:CIT1398 4.6 78.4 1.0 CB A:ASN394 4.7 44.4 1.0 O A:HOH2165 4.9 46.5 1.0 CB A:HIS175 5.0 42.5 1.0

A.C.W.Pike, K.Guo, J.Elkins, E.Ugochukwu, A.K.Roos, P.Filippakopoulos, F.Von Delft, A.Edwards, C.H.Arrowsmith, J.Weigelt, C.Bountra, U.Oppermann. Crystal Structure of Human Reticulon 4 Interacting Protein 1 in Complex with Nadph To Be Published.