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Sodium in PDB 2p7g: X-Ray Structure of Estrogen Related Receptor G in Complex with Bisphenol A.

Protein crystallography data

The structure of X-Ray Structure of Estrogen Related Receptor G in Complex with Bisphenol A., PDB code: 2p7g was solved by M.C.Abad, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 68.50 / 2.10
Space group P 41 21 2
Cell size a, b, c (Å), α, β, γ (°) 64.063, 64.063, 136.484, 90.00, 90.00, 90.00
R / Rfree (%) 21.5 / 26

Sodium Binding Sites:

The binding sites of Sodium atom in the X-Ray Structure of Estrogen Related Receptor G in Complex with Bisphenol A. (pdb code 2p7g). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the X-Ray Structure of Estrogen Related Receptor G in Complex with Bisphenol A., PDB code: 2p7g:

Sodium binding site 1 out of 1 in 2p7g

Go back to Sodium Binding Sites List in 2p7g
Sodium binding site 1 out of 1 in the X-Ray Structure of Estrogen Related Receptor G in Complex with Bisphenol A.


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of X-Ray Structure of Estrogen Related Receptor G in Complex with Bisphenol A. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Na500

b:11.2
occ:1.00
O A:ALA373 2.8 11.1 1.0
O A:HOH505 2.9 7.3 1.0
NH2 A:ARG425 3.0 9.9 1.0
OE2 A:GLU307 3.0 19.8 1.0
OE1 A:GLU307 3.2 20.3 1.0
O A:ASN376 3.3 13.7 1.0
CD A:GLU307 3.4 17.7 1.0
CA A:SER377 3.4 12.1 1.0
C A:ASN376 3.5 13.1 1.0
N A:SER377 3.6 11.3 1.0
C A:ALA373 3.6 9.6 1.0
O A:HOH521 3.6 13.2 1.0
CA A:ALA373 3.7 10.3 1.0
NE A:ARG425 3.7 9.1 1.0
CZ A:ARG425 3.8 11.5 1.0
CB A:ALA373 4.1 10.3 1.0
CB A:SER377 4.2 11.7 1.0
CB A:ASN376 4.4 12.9 1.0
C A:SER377 4.5 11.4 1.0
CA A:ASN376 4.5 12.7 1.0
CG A:GLU307 4.7 13.3 1.0
O A:SER377 4.8 14.3 1.0
N A:ASN376 4.9 12.0 1.0
O A:ILE372 4.9 10.9 1.0
N A:LEU374 4.9 10.7 1.0
ND2 A:ASN376 4.9 12.1 1.0
N A:ALA373 4.9 10.2 1.0

Reference:

M.C.Abad, H.Askari, J.O'neill, A.L.Klinger, C.Milligan, F.Lewandowski, B.Springer, J.Spurlino, D.Rentzeperis. Structural Determination of Estrogen-Related Receptor Gamma in the Presence of Phenol Derivative Compounds. J.Steroid Biochem.Mol.Biol. V. 108 44 2008.
ISSN: ISSN 0960-0760
PubMed: 17964775
DOI: 10.1016/J.JSBMB.2007.06.006
Page generated: Tue Dec 15 05:53:45 2020

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