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Sodium in PDB 2p0o: Crystal Structure of A Conserved Protein From Locus EF_2437 in Enterococcus Faecalis with An Unknown Function

Protein crystallography data

The structure of Crystal Structure of A Conserved Protein From Locus EF_2437 in Enterococcus Faecalis with An Unknown Function, PDB code: 2p0o was solved by M.E.Cuff, M.Zhou, S.Moy, A.Joachimiak, Midwest Center For Structuralgenomics (Mcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 33.90 / 2.15
Space group P 63
Cell size a, b, c (Å), α, β, γ (°) 86.244, 86.244, 109.764, 90.00, 90.00, 120.00
R / Rfree (%) 18.3 / 23.3

Other elements in 2p0o:

The structure of Crystal Structure of A Conserved Protein From Locus EF_2437 in Enterococcus Faecalis with An Unknown Function also contains other interesting chemical elements:

Chlorine (Cl) 1 atom

Sodium Binding Sites:

The binding sites of Sodium atom in the Crystal Structure of A Conserved Protein From Locus EF_2437 in Enterococcus Faecalis with An Unknown Function (pdb code 2p0o). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Crystal Structure of A Conserved Protein From Locus EF_2437 in Enterococcus Faecalis with An Unknown Function, PDB code: 2p0o:

Sodium binding site 1 out of 1 in 2p0o

Go back to Sodium Binding Sites List in 2p0o
Sodium binding site 1 out of 1 in the Crystal Structure of A Conserved Protein From Locus EF_2437 in Enterococcus Faecalis with An Unknown Function


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Crystal Structure of A Conserved Protein From Locus EF_2437 in Enterococcus Faecalis with An Unknown Function within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Na371

b:61.6
occ:1.00
O A:ASP210 2.3 64.4 1.0
O A:MSE208 2.4 64.7 1.0
O A:VAL213 2.5 59.2 1.0
C A:ASP210 3.4 64.6 1.0
C A:MSE208 3.4 65.1 1.0
C A:VAL213 3.6 59.2 1.0
N A:ASP210 3.9 65.0 1.0
CE A:MSE208 3.9 76.8 1.0
C A:ALA209 4.1 64.7 1.0
N A:VAL213 4.1 60.9 1.0
CA A:MSE208 4.2 64.9 1.0
CA A:PRO211 4.2 64.4 1.0
N A:PRO211 4.2 64.8 1.0
CA A:ASP210 4.2 65.0 1.0
O A:LEU207 4.2 63.4 1.0
CA A:VAL213 4.3 58.9 1.0
N A:ALA209 4.4 65.0 1.0
C A:PRO211 4.4 64.5 1.0
O A:ALA209 4.4 64.7 1.0
CB A:VAL213 4.4 58.4 1.0
CA A:ALA209 4.5 64.8 1.0
O A:HOH458 4.6 63.2 1.0
N A:ASP214 4.7 58.5 1.0
O A:PRO211 4.7 64.4 1.0
N A:TYR212 4.7 63.5 1.0
CA A:ASP214 4.9 59.9 1.0
CG A:MSE208 5.0 70.2 1.0
CB A:ASP210 5.0 64.7 1.0
SE A:MSE208 5.0 78.7 1.0

Reference:

M.E.Cuff, M.Zhou, S.Moy, A.Joachimiak. The Structure of A Conserved Protein From Locus EF_2437 in Enterococcus Faecalis with An Unknown Function. To Be Published.
Page generated: Tue Dec 15 05:53:32 2020

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