Sodium in the structure of Crystal Structure of A Conserved Protein From Locus EF_2437 in Enterococcus Faecalis With An Unknown Function (pdb 2p0o)

The binding sites of Sodium atom in the structure of Crystal Structure of A Conserved Protein From Locus EF_2437 in Enterococcus Faecalis With An Unknown Function (pdb code 2p0o). This binding sites where shown with 5.0 Angstroms radius around Sodium atom. The 2p0o structure was solved by M.E.CUFF, M.ZHOU, S.MOY, A.JOACHIMIAK, MIDWEST CENTER FOR STRUCTURALGENOMICS (MCSG), with X-Ray Crystallography technique, brief refinement statistics is given in the table below: Resolution (A) 33.9-2.1 Space group P63 a (A) 86.244 b (A) 86.244 c (A) 109.764 alpha (°) 90.00 beta (°) 90.00 gamma (°) 120.00 Rfactor (%) 18.3 Rfree (%) 23.3 Sodium Binding Sites: Sodium binding site 1 out of 1 in 2p0o Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 1 of Sodium in the PDB 2p0o. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: Leu207, A: Mse208, A: Ala209, A: Asp210, A: Pro211, A: Tyr212, A: Val213, A: Asp214, A: Hoh458, conact list: Atom Atom Distance (A) Na O A:Leu207 4.25 Na SE A:Mse208 4.98 Na O A:Mse208 2.39 Na CE A:Mse208 3.91 Na C A:Mse208 3.43 Na CG A:Mse208 4.96 Na CA A:Mse208 4.17 Na O A:Ala209 4.39 Na N A:Ala209 4.37 Na C A:Ala209 4.06 Na CA A:Ala209 4.53 Na O A:Asp210 2.27 Na N A:Asp210 3.91 Na CB A:Asp210 4.97 Na C A:Asp210 3.36 Na CA A:Asp210 4.24 Na O A:Pro211 4.72 Na N A:Pro211 4.23 Na C A:Pro211 4.39 Na CA A:Pro211 4.23 Na N A:Tyr212 4.73 Na O A:Val213 2.49 Na N A:Val213 4.07 Na CB A:Val213 4.40 Na C A:Val213 3.65 Na CA A:Val213 4.28 Na N A:Asp214 4.72 Na CA A:Asp214 4.90 Na O A:Hoh458 4.65 interactive model: