Sodium in PDB 2og5: Crystal Structure of Asparagine Oxygenase (Asno)

The structure of Crystal Structure of Asparagine Oxygenase (Asno), PDB code: 2og5 was solved by L.O.Essen, M.Strieker, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	22.91 / 1.45
Space group	P 31 2 1
Cell size a, b, c (Å), α, β, γ (°)	91.610, 91.610, 90.878, 90.00, 90.00, 120.00
R / Rfree (%)	17 / 18.6

The binding sites of Sodium atom in the Crystal Structure of Asparagine Oxygenase (Asno) (pdb code 2og5). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Crystal Structure of Asparagine Oxygenase (Asno), PDB code: 2og5:

Sodium binding site 1 out of 1 in the Crystal Structure of Asparagine Oxygenase (Asno)


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Crystal Structure of Asparagine Oxygenase (Asno) within 5.0Å range: probe atom residue distance (Å) B Occ A:Na401 b:21.6 occ:1.00 O A:HOH643 2.0 34.0 1.0 OE1 A:GLU157 2.0 31.4 1.0 O A:HOH712 2.0 38.4 1.0 NE2 A:HIS287 2.1 27.2 1.0 NE2 A:HIS155 2.4 24.5 1.0 O A:HOH710 2.5 31.0 1.0 CE1 A:HIS287 2.7 25.6 1.0 CD A:GLU157 3.1 29.0 1.0 CE1 A:HIS155 3.2 23.6 1.0 CD2 A:HIS287 3.3 25.2 1.0 CD2 A:HIS155 3.5 24.4 1.0 OE2 A:GLU157 3.6 34.5 1.0 ND1 A:HIS287 3.9 24.6 1.0 CG A:HIS287 4.2 22.2 1.0 NH1 A:ARG305 4.3 27.8 1.0 CG A:GLU157 4.4 22.5 1.0 ND1 A:HIS155 4.4 22.3 1.0 O A:HOH453 4.5 32.0 1.0 CG A:HIS155 4.5 21.2 1.0 CB A:GLU157 4.6 21.0 1.0 O A:HOH688 4.6 57.5 1.0 CA A:GLU157 4.7 20.3 1.0 O A:HOH695 5.0 61.8 1.0 CD2 A:LEU152 5.0 22.4 1.0

M.Strieker, F.Kopp, C.Mahlert, L.O.Essen, M.A.Marahiel. Mechanistic and Structural Basis of Stereospecific Cbeta-Hydroxylation in Calcium-Dependent Antibiotic, A Daptomycin-Type Lipopeptide. Acs Chem.Biol. V. 2 187 2007.
ISSN: ISSN 1554-8929
PubMed: 17373765
DOI: 10.1021/CB700012Y