Sodium in PDB 2o9j: Crystal Structure of Calcium Atpase with Bound Magnesium Fluoride and Cyclopiazonic Acid

Enzymatic activity of Crystal Structure of Calcium Atpase with Bound Magnesium Fluoride and Cyclopiazonic Acid

All present enzymatic activity of Crystal Structure of Calcium Atpase with Bound Magnesium Fluoride and Cyclopiazonic Acid:
3.6.3.8;

Protein crystallography data

The structure of Crystal Structure of Calcium Atpase with Bound Magnesium Fluoride and Cyclopiazonic Acid, PDB code: 2o9j was solved by H.S.Young, K.A.Moncoq, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

*Resolution Low / High (Å)*	29.10 / 2.65
*Space group*	C 1 2 1
*Cell size a, b, c (Å), α, β, γ (°)*	175.383, 69.875, 143.411, 90.00, 107.10, 90.00
*R / R_free (%)*	24.6 / 28.7

Other elements in 2o9j:

The structure of Crystal Structure of Calcium Atpase with Bound Magnesium Fluoride and Cyclopiazonic Acid also contains other interesting chemical elements:

Fluorine	(F)	4 atoms
Magnesium	(Mg)	2 atoms

Sodium Binding Sites:

The binding sites of Sodium atom in the Crystal Structure of Calcium Atpase with Bound Magnesium Fluoride and Cyclopiazonic Acid (pdb code 2o9j). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Crystal Structure of Calcium Atpase with Bound Magnesium Fluoride and Cyclopiazonic Acid, PDB code: 2o9j:

Sodium binding site 1 out of 1 in 2o9j

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Sodium Binding Sites List in 2o9j

Sodium binding site 1 out of 1 in the Crystal Structure of Calcium Atpase with Bound Magnesium Fluoride and Cyclopiazonic Acid

Mono view

Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Crystal Structure of Calcium Atpase with Bound Magnesium Fluoride and Cyclopiazonic Acid within 5.0Å range:

probe	atom	residue	distance (Å)	B	Occ
A:Na997 b:48.5 occ:1.00	O	A:LYS712	2.6	50.8	1.0
	O	A:ALA714	2.7	50.6	1.0
	C	A:LYS712	3.8	50.2	1.0
	C	A:ALA714	3.9	50.3	1.0
	O	A:GLU715	4.3	52.2	1.0
	OE2	A:GLU732	4.4	61.9	1.0
	C	A:LYS713	4.4	50.0	1.0
	O	A:LYS713	4.5	50.0	1.0
	C	A:GLU715	4.5	51.7	1.0
	N	A:ALA714	4.6	49.7	1.0
	CA	A:GLU715	4.6	51.6	1.0
	CA	A:LYS712	4.7	49.9	1.0
	N	A:LYS713	4.7	50.1	1.0
	CA	A:LYS713	4.8	50.4	1.0
	N	A:GLU715	4.8	51.0	1.0
	CA	A:ALA714	4.9	49.9	1.0
	O	A:LEU711	4.9	47.3	1.0

Reference:

K.Moncoq, C.A.Trieber, H.S.Young. The Molecular Basis For Cyclopiazonic Acid Inhibition of the Sarcoplasmic Reticulum Calcium Pump. J.Biol.Chem. V. 282 9748 2007.
ISSN: ISSN 0021-9258
PubMed: 17259168
DOI: 10.1074/JBC.M611653200

Page generated: Mon Oct 7 03:08:54 2024

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