Sodium in PDB 2mco: Structural Studies on Dinuclear Ruthenium(II) Complexes That Bind Diastereoselectively to An Anti-Parallel Folded Human Telomere Sequence

The structure of Structural Studies on Dinuclear Ruthenium(II) Complexes That Bind Diastereoselectively to An Anti-Parallel Folded Human Telomere Sequence also contains other interesting chemical elements:

Ruthenium

(Ru)

10 atoms

The binding sites of Sodium atom in the Structural Studies on Dinuclear Ruthenium(II) Complexes That Bind Diastereoselectively to An Anti-Parallel Folded Human Telomere Sequence (pdb code 2mco). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total 2 binding sites of Sodium where determined in the Structural Studies on Dinuclear Ruthenium(II) Complexes That Bind Diastereoselectively to An Anti-Parallel Folded Human Telomere Sequence, PDB code: 2mco:
Jump to Sodium binding site number: 1; 2;

Sodium binding site 1 out of 2 in the Structural Studies on Dinuclear Ruthenium(II) Complexes That Bind Diastereoselectively to An Anti-Parallel Folded Human Telomere Sequence


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Structural Studies on Dinuclear Ruthenium(II) Complexes That Bind Diastereoselectively to An Anti-Parallel Folded Human Telomere Sequence within 5.0Å range: probe atom residue distance (Å) B Occ A:Na102 b:0.0 occ:1.00 O6 A:DG3 2.3 0.0 1.0 O6 A:DG8 2.3 0.0 1.0 O6 A:DG20 2.4 0.0 1.0 O6 A:DG15 2.4 0.0 1.0 O6 A:DG16 2.5 0.0 1.0 O6 A:DG4 2.6 0.0 1.0 O6 A:DG9 2.7 0.0 1.0 H1 A:DG4 3.3 0.0 1.0 C6 A:DG8 3.3 0.0 1.0 C6 A:DG3 3.3 0.0 1.0 H1 A:DG9 3.3 0.0 1.0 H1 A:DG16 3.3 0.0 1.0 H1 A:DG8 3.4 0.0 1.0 C6 A:DG20 3.4 0.0 1.0 C6 A:DG16 3.5 0.0 1.0 C6 A:DG15 3.5 0.0 1.0 H1 A:DG20 3.5 0.0 1.0 C6 A:DG4 3.5 0.0 1.0 C6 A:DG9 3.6 0.0 1.0 N1 A:DG8 3.8 0.0 1.0 N1 A:DG16 3.8 0.0 1.0 N1 A:DG9 3.8 0.0 1.0 N1 A:DG4 3.8 0.0 1.0 H1 A:DG3 3.9 0.0 1.0 N1 A:DG20 3.9 0.0 1.0 O6 A:DG21 4.0 0.0 1.0 N1 A:DG3 4.1 0.0 1.0 NA A:NA103 4.1 0.0 1.0 H1 A:DG15 4.2 0.0 1.0 N1 A:DG15 4.3 0.0 1.0 C5 A:DG15 4.4 0.0 1.0 C5 A:DG3 4.4 0.0 1.0 O2 A:DT6 4.5 0.0 1.0 C5 A:DG8 4.5 0.0 1.0 N7 A:DG15 4.6 0.0 1.0 C5 A:DG20 4.7 0.0 1.0 C6 A:DG21 4.7 0.0 1.0 H1 A:DG21 4.7 0.0 1.0 N7 A:DG3 4.7 0.0 1.0 C2 A:DT6 4.7 0.0 1.0 C5 A:DG16 4.8 0.0 1.0 O6 A:DG2 4.8 0.0 1.0 C5 A:DG4 4.8 0.0 1.0 C5 A:DG9 4.9 0.0 1.0 H3 A:DT6 4.9 0.0 1.0 N3 A:DT6 4.9 0.0 1.0 O6 A:DG10 5.0 0.0 1.0

Sodium binding site 2 out of 2 in the Structural Studies on Dinuclear Ruthenium(II) Complexes That Bind Diastereoselectively to An Anti-Parallel Folded Human Telomere Sequence


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 2 of Structural Studies on Dinuclear Ruthenium(II) Complexes That Bind Diastereoselectively to An Anti-Parallel Folded Human Telomere Sequence within 5.0Å range: probe atom residue distance (Å) B Occ A:Na103 b:0.0 occ:1.00 O6 A:DG10 2.3 0.0 1.0 O6 A:DG14 2.3 0.0 1.0 O6 A:DG2 2.3 0.0 1.0 O6 A:DG21 2.6 0.0 1.0 O6 A:DG15 2.6 0.0 1.0 O6 A:DG22 2.6 0.0 1.0 O6 A:DG9 2.8 0.0 1.0 C6 A:DG15 3.2 0.0 1.0 H1 A:DG14 3.2 0.0 1.0 H1 A:DG10 3.3 0.0 1.0 H1 A:DG2 3.3 0.0 1.0 C6 A:DG2 3.4 0.0 1.0 C6 A:DG14 3.4 0.0 1.0 C6 A:DG10 3.4 0.0 1.0 H1 A:DG15 3.5 0.0 1.0 C6 A:DG9 3.5 0.0 1.0 C6 A:DG22 3.5 0.0 1.0 O6 A:DG3 3.6 0.0 1.0 H1 A:DG22 3.6 0.0 1.0 N1 A:DG15 3.6 0.0 1.0 C6 A:DG21 3.8 0.0 1.0 N1 A:DG14 3.8 0.0 1.0 N1 A:DG2 3.8 0.0 1.0 N1 A:DG10 3.8 0.0 1.0 H1 A:DG9 3.8 0.0 1.0 N1 A:DG22 3.9 0.0 1.0 H1 A:DG21 4.0 0.0 1.0 N1 A:DG9 4.1 0.0 1.0 C5 A:DG15 4.1 0.0 1.0 NA A:NA102 4.1 0.0 1.0 N1 A:DG21 4.4 0.0 1.0 H3 A:2FJ101 4.4 0.0 1.0 C5 A:DG9 4.5 0.0 1.0 C6 A:DG3 4.5 0.0 1.0 N7 A:DG15 4.6 0.0 1.0 H1 A:DG3 4.7 0.0 1.0 C2 A:DG15 4.7 0.0 1.0 C5 A:DG22 4.7 0.0 1.0 C5 A:DG14 4.7 0.0 1.0 C5 A:DG10 4.7 0.0 1.0 C5 A:DG2 4.7 0.0 1.0 C3 A:2FJ101 4.8 0.0 1.0 H25 A:2FJ101 4.9 0.0 1.0 C5 A:DG21 4.9 0.0 1.0 C2 A:DG22 4.9 0.0 1.0 N1 A:DG3 5.0 0.0 1.0

T.Wilson, P.J.Costa, V.Felix, M.P.Williamson, J.A.Thomas. Structural Studies on Dinuclear Ruthenium(II) Complexes That Bind Diastereoselectively to An Antiparallel Folded Human Telomere Sequence. J.Med.Chem. V. 56 8674 2013.
ISSN: ISSN 0022-2623
PubMed: 24088028
DOI: 10.1021/JM401119B