Sodium in PDB 2idl: Crystal Structure of Conserved Protein of Unknown Function From Streptococcus Pneumoniae

The structure of Crystal Structure of Conserved Protein of Unknown Function From Streptococcus Pneumoniae, PDB code: 2idl was solved by B.Nocek, R.Wu, J.Abdullah, A.Joachimiak, Midwest Center For Structuralgenomics (Mcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	40.00 / 1.70
Space group	C 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	52.665, 62.359, 63.415, 90.00, 100.92, 90.00
R / Rfree (%)	16.8 / 22.6

The binding sites of Sodium atom in the Crystal Structure of Conserved Protein of Unknown Function From Streptococcus Pneumoniae (pdb code 2idl). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Crystal Structure of Conserved Protein of Unknown Function From Streptococcus Pneumoniae, PDB code: 2idl:

Sodium binding site 1 out of 1 in the Crystal Structure of Conserved Protein of Unknown Function From Streptococcus Pneumoniae


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Crystal Structure of Conserved Protein of Unknown Function From Streptococcus Pneumoniae within 5.0Å range: probe atom residue distance (Å) B Occ B:Na115 b:15.1 occ:1.00 O B:HOH180 2.3 33.8 1.0 OE2 B:GLU13 2.3 20.2 1.0 O B:HOH131 2.3 27.7 1.0 OD2 B:ASP11 2.4 22.0 1.0 O B:HOH163 2.7 30.9 1.0 CG B:ASP11 3.3 21.7 1.0 CD B:GLU13 3.5 21.1 1.0 OD1 B:ASP11 3.6 20.4 1.0 NH1 B:ARG81 3.9 19.1 1.0 O B:HOH117 3.9 22.8 1.0 OE1 B:GLU13 4.2 17.8 1.0 CB B:GLU13 4.3 21.2 1.0 CG B:GLU13 4.5 21.4 1.0 O B:HOH221 4.6 43.0 1.0 CB B:ASP11 4.7 21.9 1.0 O B:HOH173 4.7 36.4 1.0 CZ B:ARG81 5.0 18.6 1.0

B.Nocek, R.Wu, J.Abdullah, A.Joachimiak. Crystal Structure of Conserved Hypothetical Protein From Streptococcus Pneumoniae TIGR4 To Be Published.