Sodium in PDB 2haz: Crystal Structure of the First Fibronectin Domain of Human NCAM1

The structure of Crystal Structure of the First Fibronectin Domain of Human NCAM1, PDB code: 2haz was solved by N.Sekulic, A.Lavie, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	20.00 / 1.70
Space group	C 2 2 21
Cell size a, b, c (Å), α, β, γ (°)	42.760, 53.880, 74.070, 90.00, 90.00, 90.00
R / Rfree (%)	21.2 / 28.6

The binding sites of Sodium atom in the Crystal Structure of the First Fibronectin Domain of Human NCAM1 (pdb code 2haz). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Crystal Structure of the First Fibronectin Domain of Human NCAM1, PDB code: 2haz:

Sodium binding site 1 out of 1 in the Crystal Structure of the First Fibronectin Domain of Human NCAM1


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Crystal Structure of the First Fibronectin Domain of Human NCAM1 within 5.0Å range: probe atom residue distance (Å) B Occ A:Na101 b:20.1 occ:1.00 OD1 A:ASP511 2.3 24.6 1.0 OD2 A:ASP511 2.4 25.6 1.0 OD2 A:ASP497 2.4 23.1 1.0 OD1 A:ASP497 2.6 23.2 1.0 CG A:ASP511 2.7 22.7 1.0 CG A:ASP497 2.9 22.5 1.0 CB A:ASP511 4.1 21.1 1.0 CB A:ASP497 4.4 20.0 1.0 CA A:ASP511 4.9 20.8 1.0

S.S.Mendiratta, N.Sekulic, F.G.Hernandez-Guzman, B.E.Close, A.Lavie, K.J.Colley. A Novel Alpha-Helix in the First Fibronectin Type III Repeat of the Neural Cell Adhesion Molecule Is Critical For N-Glycan Polysialylation. J.Biol.Chem. V. 281 36052 2006.
ISSN: ISSN 0021-9258
PubMed: 17003032
DOI: 10.1074/JBC.M608073200