Sodium in the structure of Crystal Structure Of the First Fibronectin Domain of Human NCAM1 (pdb 2haz)

The binding sites of Sodium atom in the structure of Crystal Structure Of the First Fibronectin Domain of Human NCAM1 (pdb code 2haz). This binding sites where shown with 5.0 Angstroms radius around Sodium atom. The 2haz structure was solved by N.SEKULIC, A.LAVIE, with X-Ray Crystallography technique, brief refinement statistics is given in the table below: Resolution (A) 20.0-1.7 Space group C2221 a (A) 42.760 b (A) 53.880 c (A) 74.070 alpha (°) 90.00 beta (°) 90.00 gamma (°) 90.00 Rfactor (%) 21.2 Rfree (%) 28.6 Sodium Binding Sites: Sodium binding site 1 out of 1 in 2haz Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 1 of Sodium in the PDB 2haz. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: Asp497, A: Asp511, conact list: Atom Atom Distance (A) Na CB A:Asp497 4.39 Na OD2 A:Asp497 2.39 Na OD1 A:Asp497 2.62 Na CG A:Asp497 2.86 Na CB A:Asp511 4.13 Na OD2 A:Asp511 2.38 Na OD1 A:Asp511 2.32 Na CG A:Asp511 2.66 Na CA A:Asp511 4.95 interactive model: