Sodium »
PDB 2gum-2hti »
2gws »
Sodium in PDB 2gws: Crystal Structure of Human Dna Polymerase Lambda with A G/G Mismatch in the Primer Terminus
Enzymatic activity of Crystal Structure of Human Dna Polymerase Lambda with A G/G Mismatch in the Primer Terminus
All present enzymatic activity of Crystal Structure of Human Dna Polymerase Lambda with A G/G Mismatch in the Primer Terminus:
2.7.7.7;
2.7.7.7;
Protein crystallography data
The structure of Crystal Structure of Human Dna Polymerase Lambda with A G/G Mismatch in the Primer Terminus, PDB code: 2gws
was solved by
M.Garcia-Diaz,
A.J.Picher,
K.Bebenek,
L.C.Pedersen,
T.A.Kunkel,
L.Blanco,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 50.00 / 2.40 |
| Space group | P 21 21 2 |
| Cell size a, b, c (Å), α, β, γ (°) | 192.374, 98.268, 104.960, 90.00, 90.00, 90.00 |
| R / Rfree (%) | 20.9 / 25.3 |
Other elements in 2gws:
The structure of Crystal Structure of Human Dna Polymerase Lambda with A G/G Mismatch in the Primer Terminus also contains other interesting chemical elements:
| Magnesium | (Mg) | 1 atom |
| Arsenic | (As) | 3 atoms |
| Chlorine | (Cl) | 1 atom |
Sodium Binding Sites:
The binding sites of Sodium atom in the Crystal Structure of Human Dna Polymerase Lambda with A G/G Mismatch in the Primer Terminus
(pdb code 2gws). This binding sites where shown within
5.0 Angstroms radius around Sodium atom.
In total 8 binding sites of Sodium where determined in the Crystal Structure of Human Dna Polymerase Lambda with A G/G Mismatch in the Primer Terminus, PDB code: 2gws:
Jump to Sodium binding site number: 1; 2; 3; 4; 5; 6; 7; 8;
In total 8 binding sites of Sodium where determined in the Crystal Structure of Human Dna Polymerase Lambda with A G/G Mismatch in the Primer Terminus, PDB code: 2gws:
Jump to Sodium binding site number: 1; 2; 3; 4; 5; 6; 7; 8;
Sodium binding site 1 out of 8 in 2gws
Go back to
Sodium Binding Sites List in 2gws
Sodium binding site 1 out
of 8 in the Crystal Structure of Human Dna Polymerase Lambda with A G/G Mismatch in the Primer Terminus
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Sodium with other atoms in the Na binding
site number 1 of Crystal Structure of Human Dna Polymerase Lambda with A G/G Mismatch in the Primer Terminus within 5.0Å range:
|
Sodium binding site 2 out of 8 in 2gws
Go back to
Sodium Binding Sites List in 2gws
Sodium binding site 2 out
of 8 in the Crystal Structure of Human Dna Polymerase Lambda with A G/G Mismatch in the Primer Terminus
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Sodium with other atoms in the Na binding
site number 2 of Crystal Structure of Human Dna Polymerase Lambda with A G/G Mismatch in the Primer Terminus within 5.0Å range:
|
Sodium binding site 3 out of 8 in 2gws
Go back to
Sodium Binding Sites List in 2gws
Sodium binding site 3 out
of 8 in the Crystal Structure of Human Dna Polymerase Lambda with A G/G Mismatch in the Primer Terminus
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Sodium with other atoms in the Na binding
site number 3 of Crystal Structure of Human Dna Polymerase Lambda with A G/G Mismatch in the Primer Terminus within 5.0Å range:
|
Sodium binding site 4 out of 8 in 2gws
Go back to
Sodium Binding Sites List in 2gws
Sodium binding site 4 out
of 8 in the Crystal Structure of Human Dna Polymerase Lambda with A G/G Mismatch in the Primer Terminus
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Sodium with other atoms in the Na binding
site number 4 of Crystal Structure of Human Dna Polymerase Lambda with A G/G Mismatch in the Primer Terminus within 5.0Å range:
|
Sodium binding site 5 out of 8 in 2gws
Go back to
Sodium Binding Sites List in 2gws
Sodium binding site 5 out
of 8 in the Crystal Structure of Human Dna Polymerase Lambda with A G/G Mismatch in the Primer Terminus
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Sodium with other atoms in the Na binding
site number 5 of Crystal Structure of Human Dna Polymerase Lambda with A G/G Mismatch in the Primer Terminus within 5.0Å range:
|
Sodium binding site 6 out of 8 in 2gws
Go back to
Sodium Binding Sites List in 2gws
Sodium binding site 6 out
of 8 in the Crystal Structure of Human Dna Polymerase Lambda with A G/G Mismatch in the Primer Terminus
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Sodium with other atoms in the Na binding
site number 6 of Crystal Structure of Human Dna Polymerase Lambda with A G/G Mismatch in the Primer Terminus within 5.0Å range:
|
Sodium binding site 7 out of 8 in 2gws
Go back to
Sodium Binding Sites List in 2gws
Sodium binding site 7 out
of 8 in the Crystal Structure of Human Dna Polymerase Lambda with A G/G Mismatch in the Primer Terminus
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Sodium with other atoms in the Na binding
site number 7 of Crystal Structure of Human Dna Polymerase Lambda with A G/G Mismatch in the Primer Terminus within 5.0Å range:
|
Sodium binding site 8 out of 8 in 2gws
Go back to
Sodium Binding Sites List in 2gws
Sodium binding site 8 out
of 8 in the Crystal Structure of Human Dna Polymerase Lambda with A G/G Mismatch in the Primer Terminus
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Sodium with other atoms in the Na binding
site number 8 of Crystal Structure of Human Dna Polymerase Lambda with A G/G Mismatch in the Primer Terminus within 5.0Å range:
|
Reference:
A.J.Picher,
M.Garcia-Diaz,
K.Bebenek,
L.C.Pedersen,
T.A.Kunkel,
L.Blanco.
Promiscuous Mismatch Extension By Human Dna Polymerase Lambda. Nucleic Acids Res. V. 34 3259 2006.
ISSN: ISSN 0305-1048
PubMed: 16807316
DOI: 10.1093/NAR/GKL377
Page generated: Mon Oct 7 02:43:11 2024
ISSN: ISSN 0305-1048
PubMed: 16807316
DOI: 10.1093/NAR/GKL377
Last articles
Zn in 9JYWZn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
