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Sodium in PDB 2gws: Crystal Structure of Human Dna Polymerase Lambda with A G/G Mismatch in the Primer Terminus
Enzymatic activity of Crystal Structure of Human Dna Polymerase Lambda with A G/G Mismatch in the Primer Terminus
All present enzymatic activity of Crystal Structure of Human Dna Polymerase Lambda with A G/G Mismatch in the Primer Terminus:
2.7.7.7;
2.7.7.7;
Protein crystallography data
The structure of Crystal Structure of Human Dna Polymerase Lambda with A G/G Mismatch in the Primer Terminus, PDB code: 2gws
was solved by
M.Garcia-Diaz,
A.J.Picher,
K.Bebenek,
L.C.Pedersen,
T.A.Kunkel,
L.Blanco,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 50.00 / 2.40 |
| Space group | P 21 21 2 |
| Cell size a, b, c (Å), α, β, γ (°) | 192.374, 98.268, 104.960, 90.00, 90.00, 90.00 |
| R / Rfree (%) | 20.9 / 25.3 |
Other elements in 2gws:
The structure of Crystal Structure of Human Dna Polymerase Lambda with A G/G Mismatch in the Primer Terminus also contains other interesting chemical elements:
| Magnesium | (Mg) | 1 atom |
| Arsenic | (As) | 3 atoms |
| Chlorine | (Cl) | 1 atom |
Sodium Binding Sites:
The binding sites of Sodium atom in the Crystal Structure of Human Dna Polymerase Lambda with A G/G Mismatch in the Primer Terminus
(pdb code 2gws). This binding sites where shown within
5.0 Angstroms radius around Sodium atom.
In total 8 binding sites of Sodium where determined in the Crystal Structure of Human Dna Polymerase Lambda with A G/G Mismatch in the Primer Terminus, PDB code: 2gws:
Jump to Sodium binding site number: 1; 2; 3; 4; 5; 6; 7; 8;
In total 8 binding sites of Sodium where determined in the Crystal Structure of Human Dna Polymerase Lambda with A G/G Mismatch in the Primer Terminus, PDB code: 2gws:
Jump to Sodium binding site number: 1; 2; 3; 4; 5; 6; 7; 8;
Sodium binding site 1 out of 8 in 2gws
Go back to
Sodium Binding Sites List in 2gws
Sodium binding site 1 out
of 8 in the Crystal Structure of Human Dna Polymerase Lambda with A G/G Mismatch in the Primer Terminus
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Sodium with other atoms in the Na binding
site number 1 of Crystal Structure of Human Dna Polymerase Lambda with A G/G Mismatch in the Primer Terminus within 5.0Å range:
|
Sodium binding site 2 out of 8 in 2gws
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Sodium Binding Sites List in 2gws
Sodium binding site 2 out
of 8 in the Crystal Structure of Human Dna Polymerase Lambda with A G/G Mismatch in the Primer Terminus
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Sodium with other atoms in the Na binding
site number 2 of Crystal Structure of Human Dna Polymerase Lambda with A G/G Mismatch in the Primer Terminus within 5.0Å range:
|
Sodium binding site 3 out of 8 in 2gws
Go back to
Sodium Binding Sites List in 2gws
Sodium binding site 3 out
of 8 in the Crystal Structure of Human Dna Polymerase Lambda with A G/G Mismatch in the Primer Terminus
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Sodium with other atoms in the Na binding
site number 3 of Crystal Structure of Human Dna Polymerase Lambda with A G/G Mismatch in the Primer Terminus within 5.0Å range:
|
Sodium binding site 4 out of 8 in 2gws
Go back to
Sodium Binding Sites List in 2gws
Sodium binding site 4 out
of 8 in the Crystal Structure of Human Dna Polymerase Lambda with A G/G Mismatch in the Primer Terminus
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Sodium with other atoms in the Na binding
site number 4 of Crystal Structure of Human Dna Polymerase Lambda with A G/G Mismatch in the Primer Terminus within 5.0Å range:
|
Sodium binding site 5 out of 8 in 2gws
Go back to
Sodium Binding Sites List in 2gws
Sodium binding site 5 out
of 8 in the Crystal Structure of Human Dna Polymerase Lambda with A G/G Mismatch in the Primer Terminus
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Sodium with other atoms in the Na binding
site number 5 of Crystal Structure of Human Dna Polymerase Lambda with A G/G Mismatch in the Primer Terminus within 5.0Å range:
|
Sodium binding site 6 out of 8 in 2gws
Go back to
Sodium Binding Sites List in 2gws
Sodium binding site 6 out
of 8 in the Crystal Structure of Human Dna Polymerase Lambda with A G/G Mismatch in the Primer Terminus
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Sodium with other atoms in the Na binding
site number 6 of Crystal Structure of Human Dna Polymerase Lambda with A G/G Mismatch in the Primer Terminus within 5.0Å range:
|
Sodium binding site 7 out of 8 in 2gws
Go back to
Sodium Binding Sites List in 2gws
Sodium binding site 7 out
of 8 in the Crystal Structure of Human Dna Polymerase Lambda with A G/G Mismatch in the Primer Terminus
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Sodium with other atoms in the Na binding
site number 7 of Crystal Structure of Human Dna Polymerase Lambda with A G/G Mismatch in the Primer Terminus within 5.0Å range:
|
Sodium binding site 8 out of 8 in 2gws
Go back to
Sodium Binding Sites List in 2gws
Sodium binding site 8 out
of 8 in the Crystal Structure of Human Dna Polymerase Lambda with A G/G Mismatch in the Primer Terminus
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Sodium with other atoms in the Na binding
site number 8 of Crystal Structure of Human Dna Polymerase Lambda with A G/G Mismatch in the Primer Terminus within 5.0Å range:
|
Reference:
A.J.Picher,
M.Garcia-Diaz,
K.Bebenek,
L.C.Pedersen,
T.A.Kunkel,
L.Blanco.
Promiscuous Mismatch Extension By Human Dna Polymerase Lambda. Nucleic Acids Res. V. 34 3259 2006.
ISSN: ISSN 0305-1048
PubMed: 16807316
DOI: 10.1093/NAR/GKL377
Page generated: Mon Oct 7 02:43:11 2024
ISSN: ISSN 0305-1048
PubMed: 16807316
DOI: 10.1093/NAR/GKL377
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