Sodium in the structure of Crystal Structure of Acyl Carrier Protein From Aquifex Aeolicus (Form 1) (pdb 2ehs)

The binding sites of Sodium atom in the structure of Crystal Structure of Acyl Carrier Protein From Aquifex Aeolicus (Form 1) (pdb code 2ehs). This binding sites where shown with 5.0 Angstroms radius around Sodium atom. The 2ehs structure was solved by H.MIZUTANI, N.KUNISHIMA, RIKEN STRUCTURAL GENOMICS/PROTEOMICSINITIATIVE (RSGI), with X-Ray Crystallography technique, brief refinement statistics is given in the table below: Resolution (A) 30.0-1.3 Space group P212121 a (A) 30.488 b (A) 36.970 c (A) 56.797 alpha (°) 90.00 beta (°) 90.00 gamma (°) 90.00 Rfactor (%) 19.7 Rfree (%) 22.2 Sodium Binding Sites: Sodium binding site 1 out of 1 in 2ehs Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 1 of Sodium in the PDB 2ehs. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: Glu8, A: Glu12, A: Zn202, A: Hoh210, A: Hoh226, A: Hoh246, A: Hoh319, conact list: Atom Atom Distance (A) Na O A:Glu8 4.56 Na OE1 A:Glu8 4.14 Na CB A:Glu8 4.88 Na OE2 A:Glu8 2.03 Na CD A:Glu8 3.02 Na CG A:Glu8 3.37 Na OE1 A:Glu12 2.13 Na CB A:Glu12 3.98 Na OE2 A:Glu12 4.21 Na CD A:Glu12 3.21 Na CG A:Glu12 3.81 Na ZN A:Zn202 4.15 Na O A:Hoh210 2.19 Na O A:Hoh226 4.88 Na O A:Hoh246 4.46 Na O A:Hoh319 2.00 interactive model: