Atomistry » Sodium » PDB 2czs-2e4r » 2dpw
Atomistry »
  Sodium »
    PDB 2czs-2e4r »
      2dpw »

Sodium in PDB 2dpw: Hpothetical Transferase Structure From Thermus Thermophilus

Protein crystallography data

The structure of Hpothetical Transferase Structure From Thermus Thermophilus, PDB code: 2dpw was solved by P.H.Rehse, S.Yokoyama, Riken Structural Genomics/Proteomics Initiative(Rsgi), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 38.09 / 2.90
Space group P 61 2 2
Cell size a, b, c (Å), α, β, γ (°) 76.190, 76.190, 196.980, 90.00, 90.00, 120.00
R / Rfree (%) 22.6 / 28.1

Sodium Binding Sites:

The binding sites of Sodium atom in the Hpothetical Transferase Structure From Thermus Thermophilus (pdb code 2dpw). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Hpothetical Transferase Structure From Thermus Thermophilus, PDB code: 2dpw:

Sodium binding site 1 out of 1 in 2dpw

Go back to Sodium Binding Sites List in 2dpw
Sodium binding site 1 out of 1 in the Hpothetical Transferase Structure From Thermus Thermophilus


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Hpothetical Transferase Structure From Thermus Thermophilus within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Na233

b:36.9
occ:1.00
NH2 A:ARG178 2.6 80.4 1.0
NH1 A:ARG178 3.2 73.3 1.0
CZ A:ARG178 3.3 80.3 1.0
NE A:ARG178 4.6 67.6 1.0

Reference:

P.H.Rehse, S.Yokoyama. Hypothetical Transferase From Thermus Thermophilus To Be Published.
Page generated: Tue Dec 15 05:47:35 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy