Sodium in the structure of Complexes of Dodecin With Flavin and Flavin-Like Ligands (pdb 2cjc)

The binding sites of Sodium atom in the structure of Complexes of Dodecin With Flavin and Flavin-Like Ligands (pdb code 2cjc). This binding sites where shown with 5.0 Angstroms radius around Sodium atom. The 2cjc structure was solved by M.GRININGER, F.SEILER, K.ZETH, D.OESTERHELT, with X-Ray Crystallography technique, brief refinement statistics is given in the table below: Resolution (A) 20.0-1.9 Space group F4132 a (A) 142.040 b (A) 142.040 c (A) 142.040 alpha (°) 90.00 beta (°) 90.00 gamma (°) 90.00 Rfactor (%) 19.4 Rfree (%) 22.2 Sodium Binding Sites: Sodium binding site 1 out of 1 in 2cjc Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 1 of Sodium in the PDB 2cjc. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Sodium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: Lys5, A: Leu7, A: Gln59, A: Cl105, A: Hoh2006, A: Hoh2007, A: Hoh2063, conact list: Atom Atom Distance (A) Na O A:Lys5 4.85 Na CB A:Leu7 4.38 Na CD2 A:Leu7 4.81 Na NE2 A:Gln59 4.53 Na OE1 A:Gln59 4.64 Na CL A:Cl105 2.51 Na O A:Hoh2006 2.87 Na O A:Hoh2007 4.17 Na O A:Hoh2063 2.29 interactive model: