Sodium in PDB 1soo: Adenylosuccinate Synthetase Inhibited By Hydantocidin 5'-Monophosphate

All present enzymatic activity of Adenylosuccinate Synthetase Inhibited By Hydantocidin 5'-Monophosphate:
6.3.4.4;

The structure of Adenylosuccinate Synthetase Inhibited By Hydantocidin 5'-Monophosphate, PDB code: 1soo was solved by S.W.Cowan-Jacob, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	8.00 / 2.60
Space group	P 43 21 2
Cell size a, b, c (Å), α, β, γ (°)	70.500, 70.500, 198.800, 90.00, 90.00, 90.00
R / Rfree (%)	18.7 / n/a

The binding sites of Sodium atom in the Adenylosuccinate Synthetase Inhibited By Hydantocidin 5'-Monophosphate (pdb code 1soo). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Adenylosuccinate Synthetase Inhibited By Hydantocidin 5'-Monophosphate, PDB code: 1soo:

Sodium binding site 1 out of 1 in the Adenylosuccinate Synthetase Inhibited By Hydantocidin 5'-Monophosphate


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Adenylosuccinate Synthetase Inhibited By Hydantocidin 5'-Monophosphate within 5.0Å range: probe atom residue distance (Å) B Occ A:Na547 b:4.8 occ:1.00 OD1 A:ASP13 2.2 4.3 1.0 O A:HOH594 2.3 29.0 1.0 O2 A:SO4442 2.3 20.0 1.0 O2 A:SO4443 2.3 12.5 1.0 O A:GLY40 2.6 15.4 1.0 CG A:ASP13 3.4 4.3 1.0 S A:SO4443 3.6 12.5 1.0 O3 A:SO4443 3.6 12.5 1.0 S A:SO4442 3.7 20.0 1.0 C A:GLY40 3.7 15.4 1.0 CA A:ASP13 3.9 12.5 1.0 O1 A:SO4442 4.0 20.0 1.0 CB A:ASP13 4.1 4.3 1.0 N A:GLY40 4.2 15.4 1.0 N A:ASP13 4.2 12.5 1.0 CA A:GLY40 4.3 15.4 1.0 O4 A:SO4443 4.4 12.5 1.0 OD2 A:ASP13 4.4 4.3 1.0 NH1 A:ARG305 4.5 13.7 1.0 O4 A:SO4442 4.5 20.0 1.0 O1 A:SO4443 4.5 12.5 1.0 O A:HOH579 4.5 18.5 1.0 O3 A:SO4442 4.5 20.0 1.0 O A:HOH595 4.5 39.7 1.0 N A:HIS41 4.8 53.4 1.0 O A:HOH593 4.9 40.4 1.0

R.Fonne-Pfister, P.Chemla, E.Ward, M.Girardet, K.E.Kreuz, R.B.Honzatko, H.J.Fromm, H.P.Schar, M.G.Grutter, S.W.Cowan-Jacob. The Mode of Action and the Structure of A Herbicide in Complex with Its Target: Binding of Activated Hydantocidin to the Feedback Regulation Site of Adenylosuccinate Synthetase. Proc.Natl.Acad.Sci.Usa V. 93 9431 1996.
ISSN: ISSN 0027-8424
PubMed: 8790347
DOI: 10.1073/PNAS.93.18.9431