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Sodium in PDB 1sgw: Putative Abc Transporter (Atp-Binding Protein) From Pyrococcus Furiosus Pfu-867808-001

Protein crystallography data

The structure of Putative Abc Transporter (Atp-Binding Protein) From Pyrococcus Furiosus Pfu-867808-001, PDB code: 1sgw was solved by Z.J.Liu, W.Tempel, A.Shah, L.Chen, D.Lee, L.-L.C.Kelley, B.D.Dillard, J.P.Rose, J.C.Eneh, R.C.Hopkins, F.E.Jenney Jr., H.S.Lee, F.L.Poole Ii, C.Shah, F.J.Sugar, M.W.W.Adams, D.C.Richardson, J.S.Richardson, B.C.Wang, Southeast Collaboratory For Structural Genomics (Secsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.00 / 1.70
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 44.982, 67.583, 72.768, 90.00, 90.00, 90.00
R / Rfree (%) 19.5 / 22.3

Other elements in 1sgw:

The structure of Putative Abc Transporter (Atp-Binding Protein) From Pyrococcus Furiosus Pfu-867808-001 also contains other interesting chemical elements:

Chlorine (Cl) 2 atoms

Sodium Binding Sites:

The binding sites of Sodium atom in the Putative Abc Transporter (Atp-Binding Protein) From Pyrococcus Furiosus Pfu-867808-001 (pdb code 1sgw). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Putative Abc Transporter (Atp-Binding Protein) From Pyrococcus Furiosus Pfu-867808-001, PDB code: 1sgw:

Sodium binding site 1 out of 1 in 1sgw

Go back to Sodium Binding Sites List in 1sgw
Sodium binding site 1 out of 1 in the Putative Abc Transporter (Atp-Binding Protein) From Pyrococcus Furiosus Pfu-867808-001


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Putative Abc Transporter (Atp-Binding Protein) From Pyrococcus Furiosus Pfu-867808-001 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Na208

b:25.6
occ:1.00
OE2 A:GLU125 2.7 38.1 1.0
OE1 A:GLU125 2.9 36.9 1.0
CD A:GLU125 3.0 32.4 1.0
N A:LYS122 3.2 14.5 1.0
CG A:LYS122 3.7 18.7 1.0
CB A:LYS122 3.8 16.7 1.0
CA A:LYS121 4.0 16.7 1.0
CD A:LYS122 4.0 25.4 1.0
CG A:LYS121 4.1 19.5 1.0
C A:LYS121 4.1 14.4 1.0
CA A:LYS122 4.1 15.0 1.0
CG A:GLU125 4.2 24.5 1.0
CB A:LYS121 4.6 19.8 1.0
O A:LYS120 4.7 17.0 1.0
CB A:GLU125 4.7 18.0 1.0
O A:LYS122 4.9 13.9 1.0

Reference:

Z.J.Liu, W.Tempel, A.Shah, L.Chen, D.Lee, L.-L.C.Kelley, B.D.Dillard, J.P.Rose, J.C.Eneh, R.C.Hopkins, F.E.Jenney Jr., H.S.Lee, F.L.Poole Ii, C.Shah, F.J.Sugar, M.W.W.Adams, D.C.Richardson, J.S.Richardson, B.C.Wang, Southeast Collaboratory For Structural Genomics. Putative Abc Transporter (Atp-Binding Protein) From Pyrococcus Furiosus Pfu-867808-001 To Be Published.
Page generated: Sun Oct 6 22:24:42 2024

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