Sodium in PDB 1rwt: Crystal Structure of Spinach Major Light-Harvesting Complex at 2.72 Angstrom Resolution

The structure of Crystal Structure of Spinach Major Light-Harvesting Complex at 2.72 Angstrom Resolution, PDB code: 1rwt was solved by Z.Liu, H.Yan, K.Wang, T.Kuang, J.Zhang, L.Gui, X.An, W.Chang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	10.00 / 2.72
Space group	H 3 2 1
Cell size a, b, c (Å), α, β, γ (°)	261.787, 261.787, 660.498, 90.00, 90.00, 120.00
R / Rfree (%)	19.4 / 22.1

The structure of Crystal Structure of Spinach Major Light-Harvesting Complex at 2.72 Angstrom Resolution also contains other interesting chemical elements:

Magnesium

(Mg)

140 atoms

The binding sites of Sodium atom in the Crystal Structure of Spinach Major Light-Harvesting Complex at 2.72 Angstrom Resolution (pdb code 1rwt). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Crystal Structure of Spinach Major Light-Harvesting Complex at 2.72 Angstrom Resolution, PDB code: 1rwt:

Sodium binding site 1 out of 1 in the Crystal Structure of Spinach Major Light-Harvesting Complex at 2.72 Angstrom Resolution


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Crystal Structure of Spinach Major Light-Harvesting Complex at 2.72 Angstrom Resolution within 5.0Å range: probe atom residue distance (Å) B Occ A:Na634 b:1.3 occ:0.33 O A:HOH694 2.8 38.8 1.0 C4 A:CLA603 4.1 57.9 1.0 O A:HOH680 4.4 31.3 1.0 O A:HOH693 4.5 45.3 1.0 CD2 A:LEU51 4.5 32.7 1.0

Z.Liu, H.Yan, K.Wang, T.Kuang, J.Zhang, L.Gui, X.An, W.Chang. Crystal Structure of Spinach Major Light-Harvesting Complex at 2.72 A Resolution Nature V. 428 287 2004.
ISSN: ISSN 0028-0836
PubMed: 15029188
DOI: 10.1038/NATURE02373