Atomistry » Sodium » PDB 1nnh-1oan » 1nsv
Atomistry »
  Sodium »
    PDB 1nnh-1oan »
      1nsv »

Sodium in PDB 1nsv: Crystal Structure of Galactose Mutarotase From Lactococcus Lactis Mutant H96N Complexed with Glucose

Enzymatic activity of Crystal Structure of Galactose Mutarotase From Lactococcus Lactis Mutant H96N Complexed with Glucose

All present enzymatic activity of Crystal Structure of Galactose Mutarotase From Lactococcus Lactis Mutant H96N Complexed with Glucose:
5.1.3.3;

Protein crystallography data

The structure of Crystal Structure of Galactose Mutarotase From Lactococcus Lactis Mutant H96N Complexed with Glucose, PDB code: 1nsv was solved by H.M.Holden, J.B.Thoden, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.00 / 1.80
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 44.900, 76.400, 210.900, 90.00, 90.00, 90.00
R / Rfree (%) 15.7 / 21.6

Sodium Binding Sites:

The binding sites of Sodium atom in the Crystal Structure of Galactose Mutarotase From Lactococcus Lactis Mutant H96N Complexed with Glucose (pdb code 1nsv). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Crystal Structure of Galactose Mutarotase From Lactococcus Lactis Mutant H96N Complexed with Glucose, PDB code: 1nsv:

Sodium binding site 1 out of 1 in 1nsv

Go back to Sodium Binding Sites List in 1nsv
Sodium binding site 1 out of 1 in the Crystal Structure of Galactose Mutarotase From Lactococcus Lactis Mutant H96N Complexed with Glucose


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Crystal Structure of Galactose Mutarotase From Lactococcus Lactis Mutant H96N Complexed with Glucose within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Na1401

b:48.6
occ:1.00
 O B:HOH2543 2.5 33.1 1.0
OD1 B:ASP13 2.5 21.2 1.0
OD1 A:ASP13 2.5 25.1 1.0
O A:GLY11 2.5 23.9 1.0
OD2 B:ASP13 2.6 17.9 1.0
CG B:ASP13 2.8 20.1 1.0
C A:GLY11 3.3 23.7 1.0
CG A:ASP13 3.4 26.9 1.0
O A:SER12 3.8 17.9 1.0
C A:SER12 3.9 22.3 1.0
O A:HOH1518 3.9 29.5 1.0
CA A:GLY11 3.9 18.9 1.0
O B:GLY11 3.9 25.5 1.0
OD2 A:ASP13 3.9 23.9 1.0
N A:SER12 4.1 23.0 1.0
CB B:ASP13 4.2 21.1 1.0
N A:ASP13 4.2 15.5 1.0
CA A:SER12 4.3 18.4 1.0
CB A:ASP13 4.6 17.0 1.0
CA A:ASP13 4.6 13.9 1.0
N B:ASP13 4.8 24.5 1.0
C B:SER12 4.9 21.2 1.0
CA B:ASP13 4.9 20.6 1.0
OH B:TYR109 4.9 22.1 1.0
C B:GLY11 4.9 29.2 1.0
O B:SER12 5.0 18.8 1.0

Reference:

J.B.Thoden, J.Kim, F.M.Raushel, H.M.Holden. The Catalytic Mechanism of Galactose Mutarotase Protein Sci. V. 12 1051 2003.
ISSN: ISSN 0961-8368
PubMed: 12717027
DOI: 10.1110/PS.0243203
Page generated: Sun Oct 6 21:00:39 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy