Sodium in PDB 1l3z: Crystal Structure Analysis of An Rna Heptamer

The structure of Crystal Structure Analysis of An Rna Heptamer, PDB code: 1l3z was solved by K.Shi, B.Pan, M.Sundaralingam, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	20.00 / 2.01
Space group	C 2 2 2
Cell size a, b, c (Å), α, β, γ (°)	25.740, 106.580, 30.260, 90.00, 90.00, 90.00
R / Rfree (%)	18 / 22.5

The binding sites of Sodium atom in the Crystal Structure Analysis of An Rna Heptamer (pdb code 1l3z). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Crystal Structure Analysis of An Rna Heptamer, PDB code: 1l3z:

Sodium binding site 1 out of 1 in the Crystal Structure Analysis of An Rna Heptamer


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Crystal Structure Analysis of An Rna Heptamer within 5.0Å range: probe atom residue distance (Å) B Occ A:Na301 b:64.3 occ:0.50 O A:HOH202 2.3 30.8 0.5 O A:HOH125 3.1 64.0 1.0 O A:HOH127 3.1 58.7 1.0 N6 A:A7 4.9 32.5 1.0 N1 A:A7 5.0 31.5 1.0

K.Shi, B.Pan, M.Sundaralingam. The Crystal Structure of An Alternating Rna Heptamer R(Guauaca) Forming A Six Base-Paired Duplex with 3'-End Adenine Overhangs Nucleic Acids Res. V. 31 1392 2003.
ISSN: ISSN 0305-1048
PubMed: 12595546
DOI: 10.1093/NAR/GKG226