Sodium in PDB 1kjt: Crystal Structure of the Gaba(A) Receptor Associated Protein, Gabarap

The structure of Crystal Structure of the Gaba(A) Receptor Associated Protein, Gabarap, PDB code: 1kjt was solved by V.N.Bavro, M.Sola, A.Bracher, M.Kneussel, H.Betz, W.Weissenhorn, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	30.00 / 2.00
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	29.720, 56.040, 64.990, 90.00, 90.00, 90.00
R / Rfree (%)	23.5 / 26.1

The structure of Crystal Structure of the Gaba(A) Receptor Associated Protein, Gabarap also contains other interesting chemical elements:

Nickel

(Ni)

2 atoms

The binding sites of Sodium atom in the Crystal Structure of the Gaba(A) Receptor Associated Protein, Gabarap (pdb code 1kjt). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Crystal Structure of the Gaba(A) Receptor Associated Protein, Gabarap, PDB code: 1kjt:

Sodium binding site 1 out of 1 in the Crystal Structure of the Gaba(A) Receptor Associated Protein, Gabarap


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Crystal Structure of the Gaba(A) Receptor Associated Protein, Gabarap within 5.0Å range: probe atom residue distance (Å) B Occ A:Na203 b:56.2 occ:1.00 O A:HOH221 2.6 49.7 1.0 O A:LEU76 3.0 38.6 1.0 NH1 A:ARG65 3.0 35.0 1.0 C A:LEU76 4.1 36.6 1.0 N A:LEU76 4.1 41.3 1.0 CZ A:ARG65 4.1 39.7 1.0 NE A:ARG65 4.4 44.0 1.0 CE2 A:TYR61 4.5 36.3 1.0 CA A:LEU76 4.5 37.4 1.0 CB A:LEU76 4.6 36.3 1.0 CD2 A:TYR61 4.7 33.7 1.0 CZ A:TYR61 4.8 34.8 1.0 O A:ASP74 5.0 45.0 1.0

V.N.Bavro, M.Sola, A.Bracher, M.Kneussel, H.Betz, W.Weissenhorn. Crystal Structure of the Gaba(A)-Receptor-Associated Protein, Gabarap. Embo Rep. V. 3 183 2002.
ISSN: ISSN 1469-221X
PubMed: 11818336
DOI: 10.1093/EMBO-REPORTS/KVF026