Sodium in PDB 1f80: Holo-(Acyl Carrier Protein) Synthase in Complex with Holo-(Acyl Carrier Protein)

All present enzymatic activity of Holo-(Acyl Carrier Protein) Synthase in Complex with Holo-(Acyl Carrier Protein):
2.7.8.7;

The structure of Holo-(Acyl Carrier Protein) Synthase in Complex with Holo-(Acyl Carrier Protein), PDB code: 1f80 was solved by K.D.Parris, L.Lin, A.Tam, R.Mathew, J.Hixon, M.Stahl, C.C.Fritz, J.Seehra, W.S.Somers, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	50.00 / 2.30
Space group	C 2 2 21
Cell size a, b, c (Å), α, β, γ (°)	78.458, 122.032, 136.767, 90.00, 90.00, 90.00
R / Rfree (%)	22.2 / 27.9

The binding sites of Sodium atom in the Holo-(Acyl Carrier Protein) Synthase in Complex with Holo-(Acyl Carrier Protein) (pdb code 1f80). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Holo-(Acyl Carrier Protein) Synthase in Complex with Holo-(Acyl Carrier Protein), PDB code: 1f80:

Sodium binding site 1 out of 1 in the Holo-(Acyl Carrier Protein) Synthase in Complex with Holo-(Acyl Carrier Protein)


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Holo-(Acyl Carrier Protein) Synthase in Complex with Holo-(Acyl Carrier Protein) within 5.0Å range: probe atom residue distance (Å) B Occ A:Na1255 b:34.5 occ:1.00 OD2 C:ASP8 2.7 36.0 1.0 O C:ILE9 3.0 34.8 1.0 OG1 A:THR104 3.0 36.4 1.0 O A:HIS105 3.0 33.2 1.0 O C:HOH139 3.1 48.5 1.0 O A:HOH1285 3.4 42.8 1.0 CG C:ASP8 3.7 34.3 1.0 C C:ILE9 3.9 34.4 1.0 C A:HIS105 4.0 32.5 1.0 N C:ILE9 4.0 30.9 1.0 N A:HIS105 4.0 31.1 1.0 OD1 C:ASP8 4.1 36.0 1.0 CB A:THR104 4.4 32.9 1.0 CA C:ILE9 4.6 32.4 1.0 CA A:HIS105 4.6 32.2 1.0 OG1 C:THR10 4.7 39.7 1.0 N C:THR10 4.7 35.3 1.0 C A:THR104 4.9 31.2 1.0 CG2 A:THR104 4.9 33.8 1.0 CA C:THR10 4.9 37.4 1.0 CB C:ASP8 4.9 30.8 1.0 CG2 A:THR106 4.9 33.4 1.0 CA A:THR104 4.9 31.6 1.0 N A:THR106 4.9 32.9 1.0 C C:ASP8 5.0 30.0 1.0 CA C:ASP8 5.0 29.9 1.0

K.D.Parris, L.Lin, A.Tam, R.Mathew, J.Hixon, M.Stahl, C.C.Fritz, J.Seehra, W.S.Somers. Crystal Structures of Substrate Binding to Bacillus Subtilis Holo-(Acyl Carrier Protein) Synthase Reveal A Novel Trimeric Arrangement of Molecules Resulting in Three Active Sites. Structure Fold.Des. V. 8 883 2000.
ISSN: ISSN 0969-2126
PubMed: 10997907
DOI: 10.1016/S0969-2126(00)00178-7