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Sodium in PDB 1exs: Structure of Porcine Beta-Lactoglobulin

Protein crystallography data

The structure of Structure of Porcine Beta-Lactoglobulin, PDB code: 1exs was solved by J.P.Abrahams, F.J.Hoedemaeker, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 40.00 / 2.39
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 80.605, 80.605, 78.520, 90.00, 90.00, 120.00
R / Rfree (%) 21.9 / 28.2

Sodium Binding Sites:

The binding sites of Sodium atom in the Structure of Porcine Beta-Lactoglobulin (pdb code 1exs). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Structure of Porcine Beta-Lactoglobulin, PDB code: 1exs:

Sodium binding site 1 out of 1 in 1exs

Go back to Sodium Binding Sites List in 1exs
Sodium binding site 1 out of 1 in the Structure of Porcine Beta-Lactoglobulin


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Structure of Porcine Beta-Lactoglobulin within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Na2001

b:34.4
occ:1.00
OE2 A:GLU51 3.2 39.8 1.0
CG A:PRO50 3.8 32.3 1.0
CB A:PRO50 4.0 36.0 1.0
CD A:GLU51 4.1 38.9 1.0
CD A:PRO50 4.1 34.2 1.0
OE1 A:GLU51 4.2 37.6 1.0

Reference:

F.J.Hoedemaeker, R.W.Visschers, A.C.Alting, K.G.De Kruif, M.E.Kuil, J.P.Abrahams. A Novel pH-Dependent Dimerization Motif in Beta-Lactoglobulin From Pig (Sus Scrofa). Acta Crystallogr.,Sect.D V. 58 480 2002.
ISSN: ISSN 0907-4449
PubMed: 11856834
DOI: 10.1107/S0907444902000616
Page generated: Tue Dec 15 05:23:45 2020

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