Sodium in PDB 1exc: Crystal Structure of B. Subtilis Maf Protein Complexed with D-(Utp)

The structure of Crystal Structure of B. Subtilis Maf Protein Complexed with D-(Utp), PDB code: 1exc was solved by G.Minasov, M.Teplova, G.C.Stewart, E.V.Koonin, W.F.Anderson, M.Egli, Midwest Center For Structural Genomics (Mcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	17.00 / 2.70
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	62.100, 86.580, 93.730, 90.00, 90.00, 90.00
R / Rfree (%)	19.7 / 26

The binding sites of Sodium atom in the Crystal Structure of B. Subtilis Maf Protein Complexed with D-(Utp) (pdb code 1exc). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Crystal Structure of B. Subtilis Maf Protein Complexed with D-(Utp), PDB code: 1exc:

Sodium binding site 1 out of 1 in the Crystal Structure of B. Subtilis Maf Protein Complexed with D-(Utp)


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Crystal Structure of B. Subtilis Maf Protein Complexed with D-(Utp) within 5.0Å range: probe atom residue distance (Å) B Occ A:Na205 b:18.4 occ:1.00 OE2 B:GLU116 2.7 17.1 1.0 OE1 A:GLU116 2.7 25.4 1.0 OE1 B:GLU116 2.9 15.8 1.0 OE2 A:GLU116 2.9 26.8 1.0 CD A:GLU116 3.0 24.3 1.0 CD B:GLU116 3.1 14.7 1.0 ND1 A:HIS184 3.1 51.2 1.0 CE1 A:HIS184 3.5 51.2 1.0 CD2 B:HIS184 3.9 38.3 1.0 CG A:GLU116 4.2 19.7 1.0 CG B:HIS184 4.3 36.6 1.0 CB B:HIS184 4.3 32.5 1.0 CE1 B:HIS114 4.4 18.1 1.0 CG A:HIS184 4.4 49.0 1.0 NE2 B:HIS114 4.4 19.6 1.0 O B:ALA181 4.4 16.9 1.0 CG B:GLU116 4.5 10.6 1.0 CA B:ALA181 4.6 17.2 1.0 NE2 A:HIS184 4.7 52.1 1.0 CB B:ALA181 4.8 16.8 1.0 NE2 B:HIS184 4.9 38.7 1.0 O A:HOH226 4.9 36.7 1.0 CA A:ALA181 4.9 24.8 1.0 CB A:ALA181 5.0 21.1 1.0 NE2 A:HIS114 5.0 23.0 1.0

G.Minasov, M.Teplova, G.C.Stewart, E.V.Koonin, W.F.Anderson, M.Egli. Functional Implications From Crystal Structures of the Conserved Bacillus Subtilis Protein Maf with and Without Dutp. Proc.Natl.Acad.Sci.Usa V. 97 6328 2000.
ISSN: ISSN 0027-8424
PubMed: 10841541
DOI: 10.1073/PNAS.97.12.6328