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Sodium in PDB 1evr: The Structure of the Resorcinol/Insulin R6 Hexamer

Protein crystallography data

The structure of The Structure of the Resorcinol/Insulin R6 Hexamer, PDB code: 1evr was solved by G.D.Smith, E.Ciszak, L.A.Magrum, W.A.Pangborn, R.H.Blessing, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 44.75 / 1.90
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 61.350, 61.926, 47.805, 90.00, 110.61, 90.00
R / Rfree (%) 17.9 / 21.8

Other elements in 1evr:

The structure of The Structure of the Resorcinol/Insulin R6 Hexamer also contains other interesting chemical elements:

Chlorine (Cl) 2 atoms
Zinc (Zn) 2 atoms

Sodium Binding Sites:

The binding sites of Sodium atom in the The Structure of the Resorcinol/Insulin R6 Hexamer (pdb code 1evr). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the The Structure of the Resorcinol/Insulin R6 Hexamer, PDB code: 1evr:

Sodium binding site 1 out of 1 in 1evr

Go back to Sodium Binding Sites List in 1evr
Sodium binding site 1 out of 1 in the The Structure of the Resorcinol/Insulin R6 Hexamer


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of The Structure of the Resorcinol/Insulin R6 Hexamer within 5.0Å range:
probe atom residue distance (Å) B Occ
J:Na305

b:51.6
occ:1.00
OD1 J:ASN3 2.2 42.1 1.0
O J:PHE1 2.3 38.4 1.0
O J:HOH309 2.5 45.5 1.0
O E:HOH96 2.5 59.8 1.0
O J:HOH313 2.6 49.3 1.0
CG J:ASN3 3.0 39.8 1.0
ND2 J:ASN3 3.4 41.7 1.0
C J:PHE1 3.5 37.1 1.0
N J:ASN3 4.0 28.0 1.0
N J:PHE1 4.0 39.4 1.0
CA J:PHE1 4.2 37.9 1.0
CB J:ASN3 4.4 32.6 1.0
N J:VAL2 4.5 34.4 1.0
CB J:PHE1 4.6 37.4 1.0
O E:HOH72 4.6 54.3 1.0
O J:HOH310 4.6 46.2 1.0
CA J:VAL2 4.7 32.9 1.0
CA J:ASN3 4.7 30.6 1.0
C J:VAL2 4.7 31.8 1.0
N J:GLN4 4.9 30.1 1.0

Reference:

G.D.Smith, E.Ciszak, L.A.Magrum, W.A.Pangborn, R.H.Blessing. R6 Hexameric Insulin Complexed with M-Cresol or Resorcinol. Acta Crystallogr.,Sect.D V. 56 1541 2000.
ISSN: ISSN 0907-4449
PubMed: 11092919
DOI: 10.1107/S0907444900012749
Page generated: Tue Dec 15 05:23:43 2020

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