Sodium in PDB 1dph: Conformational Changes in Cubic Insulin Crystals in the pH Range 7-11

The structure of Conformational Changes in Cubic Insulin Crystals in the pH Range 7-11, PDB code: 1dph was solved by O.Gursky, J.Badger, Y.Li, D.L.D.Caspar, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	N/A / 1.90
Space group	I 21 3
Cell size a, b, c (Å), α, β, γ (°)	78.900, 78.900, 78.900, 90.00, 90.00, 90.00
R / Rfree (%)	n/a / n/a

The structure of Conformational Changes in Cubic Insulin Crystals in the pH Range 7-11 also contains other interesting chemical elements:

Chlorine

(Cl)

2 atoms

The binding sites of Sodium atom in the Conformational Changes in Cubic Insulin Crystals in the pH Range 7-11 (pdb code 1dph). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Conformational Changes in Cubic Insulin Crystals in the pH Range 7-11, PDB code: 1dph:

Sodium binding site 1 out of 1 in the Conformational Changes in Cubic Insulin Crystals in the pH Range 7-11


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Conformational Changes in Cubic Insulin Crystals in the pH Range 7-11 within 5.0Å range: probe atom residue distance (Å) B Occ A:Na88 b:10.6 occ:0.50 O A:HOH94 2.3 13.7 0.5 O A:VAL10 2.3 17.0 1.0 O A:HOH96 2.3 16.3 0.5 O A:GLN5 2.4 25.6 1.0 OG A:SER9 2.9 46.9 1.0 CB A:SER9 3.1 17.8 1.0 C A:VAL10 3.3 17.5 1.0 N A:VAL10 3.4 23.4 1.0 C A:GLN5 3.4 16.6 1.0 C A:SER9 3.5 24.5 1.0 CA A:GLN5 3.7 16.8 1.0 OE1 A:GLN5 3.8 31.3 1.0 CA A:SER9 3.8 20.1 1.0 O A:SER9 3.9 18.4 1.0 CA A:VAL10 4.0 18.4 1.0 N A:CYS11 4.2 14.9 1.0 CB A:GLN5 4.2 12.7 1.0 CA A:CYS11 4.6 17.5 1.0 N A:CYS6 4.6 17.5 1.0 N A:SER9 4.6 23.0 1.0 O A:GLU4 4.7 24.4 1.0 CD A:GLN5 4.7 25.3 1.0 NE2 A:GLN15 4.7 39.2 1.0 CB A:VAL10 4.8 24.4 1.0 CA A:CYS6 4.9 12.4 1.0

O.Gursky, J.Badger, Y.Li, D.L.Caspar. Conformational Changes in Cubic Insulin Crystals in the pH Range 7-11. Biophys.J. V. 63 1210 1992.
ISSN: ISSN 0006-3495
PubMed: 1477273