Sodium in PDB 1c4s: Chondroitin-4-Sulfate. the Structure of A Sulfated Glycosaminoglycan

The binding sites of Sodium atom in the Chondroitin-4-Sulfate. the Structure of A Sulfated Glycosaminoglycan (pdb code 1c4s). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total 6 binding sites of Sodium where determined in the Chondroitin-4-Sulfate. the Structure of A Sulfated Glycosaminoglycan, PDB code: 1c4s:
Jump to Sodium binding site number: 1; 2; 3; 4; 5; 6;

Sodium binding site 1 out of 6 in the Chondroitin-4-Sulfate. the Structure of A Sulfated Glycosaminoglycan


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Chondroitin-4-Sulfate. the Structure of A Sulfated Glycosaminoglycan within 5.0Å range: probe atom residue distance (Å) B Occ A:Na40 b:0.0 occ:1.00 O A:HOH7 2.5 0.0 1.0 O A:HOH9 2.5 0.0 1.0 O A:HOH10 2.5 0.0 1.0 O A:HOH8 2.5 0.0 1.0 O A:HOH11 2.5 0.0 1.0 OSB A:ASG2 4.7 0.0 1.0 OSC A:ASG2 5.0 0.0 1.0

Sodium binding site 2 out of 6 in the Chondroitin-4-Sulfate. the Structure of A Sulfated Glycosaminoglycan


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 2 of Chondroitin-4-Sulfate. the Structure of A Sulfated Glycosaminoglycan within 5.0Å range: probe atom residue distance (Å) B Occ A:Na41 b:0.0 occ:1.00 O A:HOH16 2.4 0.0 1.0 O A:HOH14 2.5 0.0 1.0 O A:HOH15 2.5 0.0 1.0 O A:HOH12 2.5 0.0 1.0 O A:HOH13 2.5 0.0 1.0 H3 A:GC41 4.7 0.0 1.0

Sodium binding site 3 out of 6 in the Chondroitin-4-Sulfate. the Structure of A Sulfated Glycosaminoglycan


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 3 of Chondroitin-4-Sulfate. the Structure of A Sulfated Glycosaminoglycan within 5.0Å range: probe atom residue distance (Å) B Occ A:Na42 b:0.0 occ:1.00 O A:HOH17 2.5 0.0 1.0 O A:HOH19 2.5 0.0 1.0 O A:HOH20 2.5 0.0 1.0 O A:HOH18 2.5 0.0 1.0 O A:HOH21 2.5 0.0 1.0 OSB A:ASG4 4.7 0.0 1.0 OSC A:ASG4 5.0 0.0 1.0

Sodium binding site 4 out of 6 in the Chondroitin-4-Sulfate. the Structure of A Sulfated Glycosaminoglycan


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 4 of Chondroitin-4-Sulfate. the Structure of A Sulfated Glycosaminoglycan within 5.0Å range: probe atom residue distance (Å) B Occ A:Na43 b:0.0 occ:1.00 O A:HOH26 2.4 0.0 1.0 O A:HOH22 2.5 0.0 1.0 O A:HOH24 2.5 0.0 1.0 O A:HOH23 2.5 0.0 1.0 O A:HOH25 2.5 0.0 1.0 H8A A:ASG2 3.1 0.0 1.0 C8 A:ASG2 3.9 0.0 1.0 H8B A:ASG2 4.0 0.0 1.0 H8C A:ASG2 4.1 0.0 1.0 H3 A:GCU3 4.7 0.0 1.0 HN A:ASG2 5.0 0.0 1.0

Sodium binding site 5 out of 6 in the Chondroitin-4-Sulfate. the Structure of A Sulfated Glycosaminoglycan


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 5 of Chondroitin-4-Sulfate. the Structure of A Sulfated Glycosaminoglycan within 5.0Å range: probe atom residue distance (Å) B Occ A:Na44 b:0.0 occ:1.00 O A:HOH27 2.5 0.0 1.0 O A:HOH30 2.5 0.0 1.0 O A:HOH29 2.5 0.0 1.0 O A:HOH28 2.5 0.0 1.0 O A:HOH31 2.5 0.0 1.0 OSB A:ASG6 4.7 0.0 1.0 OSC A:ASG6 5.0 0.0 1.0

Sodium binding site 6 out of 6 in the Chondroitin-4-Sulfate. the Structure of A Sulfated Glycosaminoglycan


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 6 of Chondroitin-4-Sulfate. the Structure of A Sulfated Glycosaminoglycan within 5.0Å range: probe atom residue distance (Å) B Occ A:Na45 b:0.0 occ:1.00 O A:HOH36 2.4 0.0 1.0 O A:HOH34 2.5 0.0 1.0 O A:HOH32 2.5 0.0 1.0 O A:HOH35 2.5 0.0 1.0 O A:HOH33 2.5 0.0 1.0 H8A A:ASG4 3.1 0.0 1.0 C8 A:ASG4 3.9 0.0 1.0 H8B A:ASG4 4.0 0.0 1.0 H8C A:ASG4 4.1 0.0 1.0 H3 A:GC45 4.7 0.0 1.0 HN A:ASG4 5.0 0.0 1.0

W.T.Winter, S.Arnott, D.H.Isaac, E.D.Atkins. Chondroitin 4-Sulfate: the Structure of A Sulfated Glycosaminoglycan. J.Mol.Biol. V. 125 1 1978.
ISSN: ISSN 0022-2836
PubMed: 712855
DOI: 10.1016/0022-2836(78)90251-6