Sodium in PDB 1a2c: Structure of Thrombin Inhibited By AERUGINOSIN298-A From A Blue-Green Alga

All present enzymatic activity of Structure of Thrombin Inhibited By AERUGINOSIN298-A From A Blue-Green Alga:
3.4.21.5;

The structure of Structure of Thrombin Inhibited By AERUGINOSIN298-A From A Blue-Green Alga, PDB code: 1a2c was solved by J.L.Rios-Steiner, M.Murakami, A.Tulinsky, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	7.00 / 2.10
Space group	C 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	71.970, 72.480, 72.240, 90.00, 100.93, 90.00
R / Rfree (%)	n/a / n/a

The binding sites of Sodium atom in the Structure of Thrombin Inhibited By AERUGINOSIN298-A From A Blue-Green Alga (pdb code 1a2c). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the Structure of Thrombin Inhibited By AERUGINOSIN298-A From A Blue-Green Alga, PDB code: 1a2c:

Sodium binding site 1 out of 1 in the Structure of Thrombin Inhibited By AERUGINOSIN298-A From A Blue-Green Alga


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of Structure of Thrombin Inhibited By AERUGINOSIN298-A From A Blue-Green Alga within 5.0Å range: probe atom residue distance (Å) B Occ H:Na626 b:28.0 occ:1.00 O H:LYS224 2.3 33.8 1.0 O H:ARG221A 2.6 34.7 1.0 O H:HOH503 2.9 22.7 0.8 C H:LYS224 3.4 31.9 1.0 C H:ARG221A 3.5 34.0 1.0 O H:HOH540 3.5 33.1 0.8 N H:ARG221A 3.8 32.6 1.0 N H:LYS224 3.9 31.8 1.0 C H:ASP221 4.0 32.8 1.0 CA H:ASP221 4.1 32.0 1.0 CA H:LYS224 4.2 31.2 1.0 O H:HOH482 4.3 18.7 0.7 N H:TYR225 4.4 30.6 1.0 CA H:ARG221A 4.4 33.5 1.0 N H:ASP222 4.4 34.4 1.0 OD1 H:ASP221 4.4 32.1 1.0 N H:GLY223 4.5 34.4 1.0 O H:ASP221 4.5 33.3 1.0 CA H:ASP222 4.6 35.3 1.0 CA H:TYR225 4.6 27.3 1.0 O H:TYR184A 4.7 26.4 1.0 OD2 H:ASP189 4.7 27.6 1.0 CB H:LYS224 4.7 31.4 1.0 C H:ASP222 4.7 34.8 1.0 N H:ASP221 4.8 29.9 1.0 C H:GLY223 5.0 32.6 1.0

J.L.R.Steiner, M.Murakami, A.Tulinsky. Structure of Thrombin Inhibited By Aeruginosin 298-A From A Blue-Green Alga J.Am.Chem.Soc. V. 120 597 1998.
ISSN: ISSN 0002-7863