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Sodium in PDB, part 313 (files: 12481-12520), PDB 9os1-9r4k

Experimental structures of coordination spheres of Sodium (Na) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Sodium atoms. PDB files: 12481-12520 (PDB 9os1-9r4k).
  1. 9os1 (Na: 1) - Microed Structure of Lysozyme Co-Crystallized with N,N',N"- Triacetylchitotriose
  2. 9ovr (Na: 6) - Cryoem Structural Insight Into the Breast Cancer pH Regulator NBCN1
  3. 9ow2 (Na: 2) - Crystal Structure of the Surface Protein (CD630_07380) From Clostridium Difficile Strain 630
    Other atoms: Cl (8);
  4. 9p0f (Na: 4) - Crystal Structure of the C-Terminal Cytoplasmic Domain of NSP4 From Sars-Cov-2
  5. 9p12 (Na: 1) - Lysozyme Room-Temperature in-Situ, Shipped
  6. 9p13 (Na: 1) - Lysozyme Room-Temperature in-Situ, Grown on-Site
  7. 9p4s (Na: 2) - Hmus Heme Dechelatase: Disordered Domain 1, Heme Free.
  8. 9p4z (Na: 2) - Human EAAT3 with Sodium Bound at Inward Facing State
  9. 9p6b (Na: 2) - Cryo-Em Structure of Full-Length Human TRPV1 in the Presence of Alpha- Humulene
  10. 9p6r (Na: 1) - Structure of Lysozyme-N,N',N"-Triacetylchitotriose Complex Determined Using Reyes For Automated Microed
    Other atoms: Cl (1);
  11. 9pdq (Na: 1) - Human OCTN2 Bound to Carnitine in the Occluded Conformation
  12. 9pfb (Na: 1) - Human OCTN2 Bound to Ipratropium in An Inward-Facing Conformation
  13. 9pl2 (Na: 1) - Crystal Structure of A Snoal-Like Domain-Containing Protein From Mycobacterium Ulcerans
  14. 9pmd (Na: 1) - Human OCTN2 in An Inward-Facing Conformation
  15. 9pme (Na: 1) - Crystallographic Structure of Mazf-E24A Toxin Bound to Samf
  16. 9png (Na: 1) - Co-Bound Structure of the H77C Variant of TRICYT2
    Other atoms: Co (2); Cl (6); Ca (3);
  17. 9ppm (Na: 1) - Mn-Bound Structure of the H77C Variant of TRICYT2
    Other atoms: Mn (4);
  18. 9ppo (Na: 1) - Zn-Bound Structure of the H77C Variant of TRICYT2
    Other atoms: Zn (2); Ca (4);
  19. 9ppr (Na: 1) - Zn- and Bi-Bound Structure of the H77C Variant of TRICYT2
    Other atoms: Zn (2); Cl (5); Bi (2);
  20. 9pps (Na: 1) - Co- and Bi-Bound Structure of the H77C Variant of TRICYT2
    Other atoms: Bi (1); Co (1);
  21. 9pq4 (Na: 2) - Bi-Bound Structure of the H77C Variant of TRICYT2
    Other atoms: Bi (4); Cl (1);
  22. 9pym (Na: 1) - Cryo-Em Structure of the Isethionate Trap Transporter Iseqm From Oleidesulfovibrio Alaskensis with Bound Isethionate
  23. 9pz6 (Na: 1) - Anti-Nanp Fab with G112T Light Chain Mutation
  24. 9q5e (Na: 1) - Hsa Bound to NEU5AC ALPHA2,3 Gal Beta Ome
    Other atoms: Ca (1);
  25. 9qdp (Na: 5) - De Novo Designed Enzyme For Morita-Baylis-Hillman Reaction MBH2
  26. 9qev (Na: 12) - A Native Carbonic Anhydrase From Caloramator Australiacus
    Other atoms: Zn (3);
  27. 9qez (Na: 13) - Carbonic Anhydrase Mutant
    Other atoms: Mg (3); Zn (12);
  28. 9qgb (Na: 2) - Crystal Structure of An Nadh-Accepting Ene Reductase Variant NOSTOCER1-L1,5 (Engineered Loop Swap From Achromobacter Sp. JA81)
    Other atoms: Cl (2);
  29. 9qge (Na: 1) - Crystal Structure of An Nadh-Accepting Ene Reductase Variant NOSTOCER1-L1,5 Mutant D352K
    Other atoms: Cl (2);
  30. 9qm5 (Na: 2) - Krypton-Pressurized Methyl-Coenzyme M Reductase of An Anme-2C Isolated From A Microbial Enrichment
    Other atoms: Ni (4); Cl (10); K (2); Kr (38); Mg (6);
  31. 9qui (Na: 1) - Ni(II)-Bound De Novo Protein Scaffold Tfd-Eh
    Other atoms: Ni (1);
  32. 9quo (Na: 1) - Co(II)-Bound De Novo Protein Scaffold Tfd-Eh T87E
    Other atoms: Co (1);
  33. 9qup (Na: 3) - Tb(III)-Bound De Novo Protein Scaffold Tfd-Ee Mpnn
    Other atoms: Tb (1);
  34. 9quu (Na: 2) - Triosephosphate Isomerase of Rhodococcus Sp. Jg-3
  35. 9qvs (Na: 1) - Crystal Structure of the CTAG_D144N Variant From Ruminiclostridium Cellulolyticum (P2(1)-Small)
  36. 9qys (Na: 1) - Crystal Structure of Leaf Branch Compost Cutinase Variant Iccg L50Y Q238K
    Other atoms: Cl (3);
  37. 9qyt (Na: 1) - Crystal Structure of Leaf Branch Compost Cutinase Variant Iccg L50Y T110E
  38. 9qzq (Na: 2) - Cryoem Structure of Nanodisc-Reconstituted Human Ntcp in Complex with Grafted NTCP_NB1 and Nabfab
  39. 9r4h (Na: 3) - Spitrobot-2 Advances Time-Resolvedcryo-Trapping Crystallography to Under 25 Ms: T4 Lysozyme, Mutant L99A Bound with Indole (10 S Soaking)
  40. 9r4k (Na: 1) - Crystal Structure of CTGH76 From Chaetomium Thermophilum
Page generated: Mon Dec 15 11:19:07 2025

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