Sodium in PDB, part 306 (files: 12201-12240),
PDB 9fca-9fr1
Experimental structures of coordination spheres of Sodium (Na) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Sodium atoms. PDB files: 12201-12240 (PDB 9fca-9fr1).
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9fca (Na: 2) - Hen Egg-White Lysozyme Incubated at 40% Relative Humidity
Other atoms:
Cl (4);
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9fcb (Na: 2) - Hen Egg-White Lysozyme Incubated at 34% Relative Humidity
Other atoms:
Cl (4);
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9fcc (Na: 2) - Hen Egg-White Lysozyme Incubated at 80% Relative Humidity
Other atoms:
Cl (2);
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9fcf (Na: 1) - Medicago Truncatula 5'-Profar Isomerase (HISN3) D57N Mutant in Complex with Profar
Other atoms:
Cl (1);
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9fcg (Na: 2) - Medicago Truncatula 5'-Profar Isomerase (HISN3) D57N Mutant in Complex with Prfar
Other atoms:
Cl (2);
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9fcq (Na: 1) - Cysg(N-16)-H122A Mutant in Complex with Sah From Kitasatospora Cystarginea
Other atoms:
Ca (1);
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9fdf (Na: 1) - Human Phosphoglycerate Kinase in with Mixture of Products and Substrates Produced By Cross-Soaking A Tsa Crystal
Other atoms:
Cl (1);
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9fdh (Na: 1) - Closed Human Phosphoglycerate Kinase Complex with Bpg and Adp Produced By Cross-Soaking A Tsa Crystal
Other atoms:
Mg (1);
Cl (1);
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9fdj (Na: 8) - Crystal Structure of the Nuoef Variant R66G (Nuof) From Aquifex Aeolicus Bound to Nadh Under Anoxic Conditions (Short Soak)
Other atoms:
Cl (4);
Fe (12);
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9fdk (Na: 7) - Crystal Structure of Oxidized Nuoef Variant R66G(Nuof) From Aquifex Aeolicus
Other atoms:
Cl (3);
Fe (12);
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9fdn (Na: 1) - Human Phosphoglycerate Kinase in Complex with Atp and 3PG Formed By Cross-Soaking A Tsa Crystal
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9fdv (Na: 16) - Crystal Structure of Reduced Nuoef Variant R66G(Nuof) From Aquifex Aeolicus
Other atoms:
Fe (12);
Cl (3);
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9fe0 (Na: 9) - Crystal Structure of Reduced Nuoef Variant R66G(Nuof) From Aquifex Aeolicus Bound to Nad+
Other atoms:
Fe (12);
Cl (6);
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9fe5 (Na: 6) - Crystal Structure of Nuoef Variant R66G(Nuof) From Aquifex Aeolicus Bound to Nadh Under Anoxic Conditions After 10 Min Soaking
Other atoms:
Fe (12);
Cl (2);
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9fe7 (Na: 11) - Crystal Structure of Oxidized Nuoef Variant P228R(Nuof) From Aquifex Aeolicus
Other atoms:
Fe (12);
Cl (3);
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9fe8 (Na: 8) - Crystal Structure of Reduced Nuoef Variant P228R(Nuof) From Aquifex Aeolicus
Other atoms:
Fe (12);
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9fea (Na: 14) - Crystal Structure of Reduced Nuoef Variant P228R(Nuof) From Aquifex Aeolicus Bound to Nad+
Other atoms:
Fe (12);
Cl (2);
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9feq (Na: 1) - Lssmorange (P1) - Directionality of Optical Properties of Fluorescent Proteins
Other atoms:
Ca (2);
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9fi9 (Na: 1) - Human Pif + Z48847594 (Occupancy 0.7)
Other atoms:
Mg (1);
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9fic (Na: 3) - High-Resolution X-Ray Structure of Human PC1/3 (PCSK1) Prodomain R77A, R80A,R81A Triple-Mutant
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9fid (Na: 3) - X-Ray Structure of Furin (PCSK3) in Complex with the PC1/3 (PCSK1) Prodomain Mutant R78K,R80A
Other atoms:
Ca (6);
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9fie (Na: 7) - X-Ray Structure of Furin (PCSK3) in Complex with the PC1/3 (PCSK1) Prodomain Mutant R77A,R80A,R81A
Other atoms:
Ca (12);
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9fif (Na: 7) - Crystal Structure of Nuoef Variant P228R(Nuof) From Aquifex Aeolicus Bound to Nadh Under Anoxic Conditions
Other atoms:
Fe (12);
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9fih (Na: 10) - Crystal Structure of Nuoef Variant P228R(Nuof) From Aquifex Aeolicus Bound to Nadh Under Anoxic Conditions After 10 Min Soaking
Other atoms:
Fe (12);
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9fii (Na: 9) - Crystal Structure of Oxidized Nuoef Variant E222K(Nuof) From Aquifex Aeolicus
Other atoms:
Cl (5);
Fe (12);
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9fij (Na: 15) - Crystal Structure of Reduced Nuoef Variant E222K(Nuof) From Aquifex Aeolicus
Other atoms:
Fe (12);
Cl (7);
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9fik (Na: 1) - Structure of the Fab Fragment of the Antibody NTF30037 in Complex with NTF3
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9fil (Na: 10) - Crystal Structure of Reduced Nuoef Variant E222K(Nuof) From Aquifex Aeolicus Bound to Nad+
Other atoms:
Fe (12);
Cl (3);
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9fjx (Na: 1) - Crystal Structure of Human Crbn-DDB1 in Complex with Lenalidomide
Other atoms:
Zn (1);
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9fl1 (Na: 9) - Apo Glyceraldehyde 3-Phosphate Dehydrogenase (Gapa) From Helicobacter Pylori
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9fnc (Na: 1) - Half-Closed Codh/Acs in the Carbonylated State
Other atoms:
Ni (4);
Fe (24);
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9fnf (Na: 1) - The Glycoside Hydrolase Family 71 (GH71) Member ANGH71C From Aspergillus Nidulans.
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9fnh (Na: 2) - The Glycoside Hydrolase Family 71 (GH71) Member ANGH71C From Aspergillus Nidulans in Complex with Nigerotetraose.
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9fnj (Na: 1) - Half-Closed Codh/Acs in the Acetylated State
Other atoms:
Fe (24);
Ni (4);
-
9fnk (Na: 1) - The Structure of CBM42 From Clostridium Thermocellum
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9fo4 (Na: 1) - Half-Closed Codh/Acs (Class 2) in the Methylated State
Other atoms:
Ni (4);
Fe (24);
-
9foi (Na: 3) - Structure of Human KCTD1
Other atoms:
I (2);
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9fop (Na: 1) - Half-Closed Codh/Acs (Class 1) in the Methylated State
Other atoms:
Fe (24);
Ni (4);
-
9fox (Na: 1) - Half-Closed Codh/Acs in the Reduced State
Other atoms:
Ni (4);
Fe (24);
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9fr1 (Na: 1) - Half-Closed Codh/Acs in the As-Isolated State
Other atoms:
Ni (4);
Fe (24);
Page generated: Mon Dec 15 11:18:51 2025
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