Sodium in PDB 9dam: A Darpin Fused to the 1TEL Crystallization Chaperone Via A Direct Helical Fusion

The structure of A Darpin Fused to the 1TEL Crystallization Chaperone Via A Direct Helical Fusion, PDB code: 9dam was solved by M.J.Pedroza Romo, J.C.Averett, A.Keliiliki, E.W.Wilson, C.Smith, D.Hansen, B.Averett, J.Gonzalez, E.W.Noakes, R.Nickles, T.Doukov, J.D.Moody, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	45.40 / 1.78
Space group	P 65
Cell size a, b, c (Å), α, β, γ (°)	83.29, 83.29, 58.434, 90, 90, 120
R / Rfree (%)	20.5 / 22.1

The structure of A Darpin Fused to the 1TEL Crystallization Chaperone Via A Direct Helical Fusion also contains other interesting chemical elements:

Chlorine	(Cl)	3 atoms
Magnesium	(Mg)	2 atoms

The binding sites of Sodium atom in the A Darpin Fused to the 1TEL Crystallization Chaperone Via A Direct Helical Fusion (pdb code 9dam). This binding sites where shown within 5.0 Angstroms radius around Sodium atom.
In total only one binding site of Sodium was determined in the A Darpin Fused to the 1TEL Crystallization Chaperone Via A Direct Helical Fusion, PDB code: 9dam:

Sodium binding site 1 out of 1 in the A Darpin Fused to the 1TEL Crystallization Chaperone Via A Direct Helical Fusion


Mono view


Stereo pair view

A full contact list of Sodium with other atoms in the Na binding site number 1 of A Darpin Fused to the 1TEL Crystallization Chaperone Via A Direct Helical Fusion within 5.0Å range: probe atom residue distance (Å) B Occ A:Na307 b:30.0 occ:1.00 O A:HOH518 2.2 50.1 1.0 NE2 A:HIS175 3.2 37.5 1.0 HG13 A:VAL171 3.5 41.5 1.0 HG22 A:VAL171 3.7 44.8 1.0 HG2 A:GLU137 3.8 50.4 1.0 HD2 A:HIS175 4.0 39.2 1.0 HG11 A:VAL171 4.0 41.5 1.0 CD2 A:HIS175 4.0 33.1 1.0 CG1 A:VAL171 4.2 32.8 1.0 CE1 A:HIS175 4.3 38.5 1.0 HG21 A:VAL171 4.4 44.8 1.0 CG2 A:VAL171 4.4 34.9 1.0 HE1 A:HIS175 4.4 47.9 1.0 HA A:VAL171 4.6 35.7 1.0 O A:HOH507 4.7 54.2 1.0 CG A:GLU137 4.7 40.2 1.0 OE2 A:GLU137 4.8 46.9 1.0 CB A:VAL171 4.8 30.0 1.0 CD A:GLU137 4.9 47.0 1.0 HB3 A:LYS174 4.9 44.7 1.0 HG12 A:VAL171 5.0 41.5 1.0 HB3 A:GLU137 5.0 51.9 1.0

M.J.Pedroza Romo, J.C.Averett, A.Keliiliki, E.W.Wilson, C.Smith, D.Hansen, B.Averett, J.Gonzalez, E.W.Noakes, R.Nickles, T.Doukov, J.D.Moody. Optimal Telsam-Target Protein Linker Character Is Target Protein Dependent To Be Published.